Gene Hlac_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0372 
Symbol 
ID7399765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp393781 
End bp394050 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content63% 
IMG OID643707436 
ProductThioredoxin domain protein 
Protein accessionYP_002565045 
Protein GI222478808 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3118] Thioredoxin domain-containing protein 
TIGRFAM ID[TIGR01068] thioredoxin 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.652561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTC GACTGCTGGA TTTTCACGCT GACTGGTGCG GCCCGTGTAA GACGCAGGAC 
CCGATTCTGG AGGAGATCCA GGAGGACCTC GGCGACGCCT TCGAGCTCCA GAAGGTGAAC
GTCGACGAGG AGCAGGACGT CGCCAACCAG TATCAGGTGC GCTCGCTACC AACCCTCATC
ATCGAGAACG ACGAGGGCGT CGTCGACCGG TTCGTCGGCG TCACCCAGCG CGAGGACATC
GAGGCCGCGC TCTCCGAAGC CGGCGCGTAA
 
Protein sequence
MTVRLLDFHA DWCGPCKTQD PILEEIQEDL GDAFELQKVN VDEEQDVANQ YQVRSLPTLI 
IENDEGVVDR FVGVTQREDI EAALSEAGA