Gene Hlac_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0363 
Symbol 
ID7399756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp382290 
End bp383534 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content67% 
IMG OID643707428 
Productsodium/hydrogen exchanger 
Protein accessionYP_002565037 
Protein GI222478800 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.624328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAGG CCCTCCTCGA ACTGGGGGTC ATGTTCGCTG CGATCGCCGG CGTCGGCGCG 
CTCGCGAACC GGCTCGGCCA GTCGGTGATC CCCTTCTACA TCGTCGCCGG AATGGTCCTC
GGTGAGTTCG TGCTCGGCCG GGTCGCGCTG CCGGTCGTCG GCACTACCTA CATCCCCGAG
TCGGAGTTCA TCGCGATCGG CGCGGAACTC GGGATCGTCT TTCTCCTCTT TTTCCTCGGA
CTGGAGTTCA ACCTCGATCG GCTGCTCGCG CGGCGACGCC AGATCGGGAC GGCGGGGACG
ATCGACCTCG CGAACTTCGG CGCCGGGTTC GTTCTCGGGT GGCTCGTCTT CGGCGCCTTC
CTGCCGGCGT TTCTGATCGC CGGTATCGTG TACATCTCCT CGTCGGCGGT GATCACGAAG
TCGCTCATCG ACCTCGGCTG GATCGCCAAC GACGAGGCGG AGCCGATGCT CGGGACCCTC
GTCTACGAGG ACCTGTTCAT CGCGGTGTAC CTCGCAGTCG CGTCCGCGAT CGCGCTCGGC
GGCGGGGACG TTGGGGCAGC CGCCGTCGAC GTCGGGATCG CGATCGGGTT CATCCTCGGG
CTCTTGGGCC TCGTCCAGTT CGGCACGCCC GCGTTCGCTC GGCTCGTCGA CACCACCAAC
CGGGAGTTCA TCGCGCTCCG GTCGATCGCG ACCGTAGTGC TCGTCGCAGG CGGGGCGCTC
GCGCTCGGCG TCAGCGAGGC GGTTGCCGCC TTCTTCGTCG GGATGGCGTT CGCCTCGACA
GATCACACCC ACGAGATCGA GACGCTGCTC GAACCCGTCA GAGACACGTT CGCCGCGGTG
TTCTTCTTCT GGATCGGCCT CGTCACCGAC CCGCTGCTGT TCGGCGGGGT GGCGGCGCTG
ATCGCGCTCG CGGTGATCGT GACGACGCCG ACGAAGCTCA TTACCGGCTT TCTCGCCGGG
CGTGCGTTCG ATCTGAACGC CCGCCGGTCG ACTCGCGTCG CGCTCGGAAT GACCACCCGC
GGGGAGTTCT CGCTGATCAT CGCGACGATC GCGGTGACCG CGGGGGAGGC CGGCGCATTC
GACCCGGCGC TCGCGGCGAC GATCAACGCC TTCGCCGTCG GCTACGTGCT CGTGATGGCG
ATCCTCGGCA CGACGCTGAT GCAGTACTCC GAGCCGTTCG AGTCGGCGGT GGCCTCGTGG
CTGGATCGAT CGGAACCGGC AGGTGACGGA GAGAGCAGTG GATAG
 
Protein sequence
MAEALLELGV MFAAIAGVGA LANRLGQSVI PFYIVAGMVL GEFVLGRVAL PVVGTTYIPE 
SEFIAIGAEL GIVFLLFFLG LEFNLDRLLA RRRQIGTAGT IDLANFGAGF VLGWLVFGAF
LPAFLIAGIV YISSSAVITK SLIDLGWIAN DEAEPMLGTL VYEDLFIAVY LAVASAIALG
GGDVGAAAVD VGIAIGFILG LLGLVQFGTP AFARLVDTTN REFIALRSIA TVVLVAGGAL
ALGVSEAVAA FFVGMAFAST DHTHEIETLL EPVRDTFAAV FFFWIGLVTD PLLFGGVAAL
IALAVIVTTP TKLITGFLAG RAFDLNARRS TRVALGMTTR GEFSLIIATI AVTAGEAGAF
DPALAATINA FAVGYVLVMA ILGTTLMQYS EPFESAVASW LDRSEPAGDG ESSG