Gene Hlac_0354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0354 
Symbol 
ID7399746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp374364 
End bp375074 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content71% 
IMG OID643707418 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_002565028 
Protein GI222478791 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.672315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.156318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGCCG ACGCCGACAC TGATGTCGAC GCCGTCCCGG GCTCTGACGC CGACTCCGTC 
AACCGCGCCC TCGACGCGTT CCGCGCGGGC GATCCGGTCT GTGTCCACGA CTTCGCGGAC
CGCGAGGGCG AGACGGACAT CATCTACCCG GCTGGCGCCG TCGACGAGGC GGCGGTCGCG
CACATGCGAA ACGACGCGGG TGGGCTGATC TGCGTCGCAG TCGCAGATTC CGTTGCAGAC
GCGTTCGGGC TCCCGTTCCT CGCGGACGCG CTCGACCATC CCGCGGTCAA CGACGACCCC
GAGTACGACG ATCGCTCTTC CTTCTCGCTG CCCGTGAACC ACCGCGAGAC GTTCACCGGG
ATCACCGATG AGGACCGCGC CCGAACCATC GTCGAGCTGG CGGTGTCCGC CGCCGCCGTC
GACGCCGACC CCGCGGGGTA CGACCCCGAT GACTTTGCTG CGGAGTTCCG TGCGCCCGGC
CACGTCCACG TGCTGCGGGG CGCTCACGAC GGCCTGCGCG GGCGAACCGG TCACACCGAG
CTCGGCCTTG CGATGGCTGA GGCGGTCGAC GCCGCCCCCG CCGCCGTGGT CTGCGAGATG
CTCGACGACG AGACGGGCGC CGCGCTGACG CCCGCGGACG CCGAGGCGTA CGCTCGCCGG
CGACAGATTC CCTACGTCGA GGGTGCGGCT CTCGTCGAGG CCTTTAAATA A
 
Protein sequence
MRADADTDVD AVPGSDADSV NRALDAFRAG DPVCVHDFAD REGETDIIYP AGAVDEAAVA 
HMRNDAGGLI CVAVADSVAD AFGLPFLADA LDHPAVNDDP EYDDRSSFSL PVNHRETFTG
ITDEDRARTI VELAVSAAAV DADPAGYDPD DFAAEFRAPG HVHVLRGAHD GLRGRTGHTE
LGLAMAEAVD AAPAAVVCEM LDDETGAALT PADAEAYARR RQIPYVEGAA LVEAFK