Gene Hlac_0344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0344 
Symbol 
ID7399736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp365714 
End bp366139 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content68% 
IMG OID643707408 
Productheat shock protein Hsp20 
Protein accessionYP_002565018 
Protein GI222478781 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.727239 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.120456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATCA TCATGAACAG AAACAGCCCC TTCGACGAGA TCGAGCAGTT CCTCGGCCGC 
GCCCCCTTCG GCGGCGACCG CACGTGGGGG CGTGACCTCC GGGCCACCGA CATCGATGTG
GCCGAGTACG ACGACGAGTT CGTGGTCATG GCCGACCTCC CGGGATACGA CCGCGAAGAC
ATCGACGTGC GGGCGACGGA GGGGCGGCTT ACGATTACCG CCGAGCACGA TGCGGCGAGC
GAGGACGCGG ACCGACGGTA TCTCCGGCGC GAGCGGCGCC ACGAGTCGGT CACTCGGTCC
GTCGACCTTC CGGGACCCGT CGTCGACGAG GACGCGAGCG CGACGTACCG CCACGGCGTC
CTCACGATCA CGCTCCCGAA GGCTGCCGAC GAGACGGACG ACGGCCACCG GATCGACGTG
GCGTAA
 
Protein sequence
MVIIMNRNSP FDEIEQFLGR APFGGDRTWG RDLRATDIDV AEYDDEFVVM ADLPGYDRED 
IDVRATEGRL TITAEHDAAS EDADRRYLRR ERRHESVTRS VDLPGPVVDE DASATYRHGV
LTITLPKAAD ETDDGHRIDV A