Gene Hlac_0343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0343 
Symbol 
ID7399735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp364997 
End bp365629 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content70% 
IMG OID643707407 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_002565017 
Protein GI222478780 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.328214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.118672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGACG CCGACCACGC CGCGGCCCGC CGCGAGCTTG TCGACGGACT CCGCCGCCGG 
AGCGATATCG ACGAGCGAAC GCTCGCGGCG ATCGAGTCGG TCCCGCGACA CGCGTTCGTC
CCGGAGCGCC ACCGGTCGCG TGCCTACGCG GATCGGCCGC TCCCGATCGG CCACGATCAG
ACGGTCAGCG CGCCACACAT GGTCGCGCTC ATGACCGATC TGCTCGACAT CGAACCCGGC
GACAGGGTGT TCGAGGTCGG CACAGGGTGC GGCTACCACG CCGCGGTCGT GGCCGAGATC
GTCGGCCCGG GAAACGTCTA CAGCGTTGAG TACGTTCCAG AACTAGCCGA GTCGGCCCGC
AAGCGGCTCC GGCAGCTCGG ATACGACGTG ACCGTCTGGG CCGGCGACGG GCAGATTGCC
TTCCGAGACG AGGCGCCCTT CGACGTTGCA TACTTGACCT GCGCACCGGC AGACGGCGTC
CCCGACTCGA TCGTCGACCG CGTACAGACT GGCGGCCGGG TTGTCGCGCC AGTCGGCCGT
GTCGGCGCAC AGCGGCTCGT CCGACTGACG GTCAAAGAGG AGGGCGTCGA GCGCGAGGAC
CACGGCGGGG TCCGGTTCGT TCCGATGCGG TGA
 
Protein sequence
MDDADHAAAR RELVDGLRRR SDIDERTLAA IESVPRHAFV PERHRSRAYA DRPLPIGHDQ 
TVSAPHMVAL MTDLLDIEPG DRVFEVGTGC GYHAAVVAEI VGPGNVYSVE YVPELAESAR
KRLRQLGYDV TVWAGDGQIA FRDEAPFDVA YLTCAPADGV PDSIVDRVQT GGRVVAPVGR
VGAQRLVRLT VKEEGVERED HGGVRFVPMR