| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0342 |
|---|
| Symbol | |
|---|
| ID | 7399734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 364129 |
|---|
| End bp | 364926 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643707406 |
|---|
| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| Protein accession | YP_002565016 |
|---|
| Protein GI | 222478779 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
|---|
| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.461338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.049584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGAGG CGTCGCTTCG GGCCGACATG ATCGAGGGGC TCGAACACCA GATCGGCGAG
ACGCTGGATG AGCCCGTACT GACGGCGCTT CAGCGCGTCT CCCGGGACCC GTTCGTCGAC
GACGGGGCGA CTGCGGCCGG GGGCGAGACC GGCCGAGGTG GCGGGAGCGG TGGGAACGGA
GACCGGTCGC TCACGCTGGC GACGGTGGTC CGACTGATAT CCGCACTCGA CGCCGACGCG
GGCGACGAGG TGCTCGTCGT GGGCGCGGGC GTCGGCTACT CGGTCGCGCT GCTCGCCGAG
ATAGCGGGTG CAAGACACAT TCACGCGATC GATATCGACC GAGAGGCGGT GGCGATCGCC
CGATCGAACC TCTCGACAGC CGGATACGAC GCCGTCCTCG TCGACCGACG TGACGGAGTG
AACGGGCTTC CCGAGTACGC CCCGTACGAC CGAATCCTTC TCGAAGCGAG CGTCGTCAAG
CCGCCGCGGG CACTCCGCGA GCAGCTGGCC GAGGGGGGTC GGATCGTCTA CCCCCGCGGG
ACGGCAGTCC AGACGATCGC CGCGATCGAA CCCGACTCAG GGGGAGACTC GGCGGACGAC
GGTGACGACG CTCCGACCGG GTTCCGGACG ACCGAGACGG CCGGTCCGAC GCGGCTCCAG
CCAATGCTCG TCGACGGCGA GCAGCGCGGC GTCGAGCGGA ACCGCACGCG CCGCGAAGAC
GCCGAGCGCG CCGAGCAAGG GCACTTCGCA CGTCACGGCT GGGAGCAAGA CTGGATCGAC
TGGGACGACC GGATTTGA
|
|---|
| Protein sequence | MDEASLRADM IEGLEHQIGE TLDEPVLTAL QRVSRDPFVD DGATAAGGET GRGGGSGGNG
DRSLTLATVV RLISALDADA GDEVLVVGAG VGYSVALLAE IAGARHIHAI DIDREAVAIA
RSNLSTAGYD AVLVDRRDGV NGLPEYAPYD RILLEASVVK PPRALREQLA EGGRIVYPRG
TAVQTIAAIE PDSGGDSADD GDDAPTGFRT TETAGPTRLQ PMLVDGEQRG VERNRTRRED
AERAEQGHFA RHGWEQDWID WDDRI
|
|---|
| |