| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0318 |
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| Symbol | |
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| ID | 7399708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 340893 |
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| End bp | 342665 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643707380 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_002564992 |
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| Protein GI | 222478755 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.375606 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.106516 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATT CGCCGGATCC TGCAGTCCTT TTGGATCTCG CAGGAGACAA GATCGCCGTC
CTCGACGAAG ACGGGATCTT CCGGCACCTC AACGCGGCCG TCGCCGACTT GCTCGGGTTC
CACTCGGACG ACCTCGTCGG GACGGACGCA TTCGCGCTCG TCCACCCCGA CAACGAGGAG
CGGCTCCAAG AGACCTTCGC GCGGATCGTC TCCGGGGAGC TGACACCCGA CGAGCCACTG
GAGTACCGGT ATCGCACCGC CGACGGTGGG TGGGTATGGC TCCGGACGAC GGTGCACCCG
CCCGAGGAGA CGGAAATCGA CGGGTACGTC CTGACCTCGC GGGACATCAC GAGCGAGGTC
GAGTCCCGGC GCCGACTGGA GACGATCGCA TCGGCCTCGT CCGACGTGTT CTGGATGTTC
TCCGCCGAGT GGGACGAGCT GCTGTTCATC AGCGACATCG TCGAGGAGGT CTTCGGCGTG
TCGAGGGACA CGCTCGAACG GCAGCCAAAT CGGTTCCTCG ACGTTGTCCA TCCCGATGAC
CGCTCATACG TCGAGCGAGC GATGGACCGA CTCTCGAACG GCGAATCGAC GCTGATCGAC
TACCGACTGG GGTCCGCCGA CGGGACCACG AAGTGGGTCC GCGTGCCCGG CGAGCCAGTG
ATCGAGAACG GCACGGTCGT GGCGGTCACG GGCTTCGCCC GCGATGTCAC CGACGAGTAC
CGCCGCGAGC GACAGCTCGC CGTGATGGAC AACCTTCTGC GACACACGAT CCGCAACGAC
ATGAACATCG TCGACGGGAC CGCGGAGCGC ATCGTTGACG CCGTCGCTGC CGCGGACGCG
TTCGATCCGG AGGCGTGGGG CGACAGCGTC GCGGCCGCGG AGGGTAACGC CGAGATTGGT
CCTGACGCCC TCGCCGAACT CGGGGCGGAC CTACAGGAGC ACGCGGAGAC GATCCGACGG
ATCGCCTCCG ACCTGTTGGC GACGGCAGAG AAACAGCGCG GGGTGATCGA CCTGCTGCGA
CAGCGCGGGT CACCCCGAGC GGTCGAGGTG GCGCCCGTGG TCGAGGAGGC GCTCGGAATG
GTCGTCGACG ACTGCGACGA GACGGTCGAC GTCACCTACC GCGAGCCGGT CGACGGAGAG
GGCGCGAGGG AAGGCGAGCC CGGAGACGAG ACCGAGAACG TGGACGGGAT GGCGAGTGAG
GAGACGGCAG GCGAGGGGAC GACGAATGAG GAGACGGCAG GCGAGGAGAC GGCGGGCGAC
AACTCGACAC TCCCGCGGGT ATCGGTCTCG TACCCGCCGA ACGCGAAGGC GTTCACGCAT
CCGGAGCTCG ACTACGCGAT CGCGGAGTTG GTCGAGAACG CCCTCGAACA CGCGGAGTCG
ACGCCGCGGA TCCGGATCGA CGTGTGTACA ACCGACGAGT CGATCGAGGT GTCGATCCGC
GACAACTGCC CGCCGATCCC GGTCGAGGAG CGATACGTAA TCACCGACCG ATGGGAGATG
GACGACCTCC GTCACACCGG GGGGATGGGC TTGTGGCTGG TGTACTGGGT CGCAAACCGG
TCGGGCGGCG ACCTGACCTT CGACACCCAC GCCGACGGGA ACGTCGTGAC GCTCTCCGTT
CCGAACGCGA AGTGTGGCAC GATCAACGAG GATCCACGGG AGACGACCCT GTCAAACCGC
CCGATGACCG CCGCAGTCGA GGGGGCAGAC ACGCGCATTC GGACCGACGG ATCCACCACC
TCGGAACCGA AACGGCGCGA CGAGACGGAC TGA
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| Protein sequence | MSDSPDPAVL LDLAGDKIAV LDEDGIFRHL NAAVADLLGF HSDDLVGTDA FALVHPDNEE
RLQETFARIV SGELTPDEPL EYRYRTADGG WVWLRTTVHP PEETEIDGYV LTSRDITSEV
ESRRRLETIA SASSDVFWMF SAEWDELLFI SDIVEEVFGV SRDTLERQPN RFLDVVHPDD
RSYVERAMDR LSNGESTLID YRLGSADGTT KWVRVPGEPV IENGTVVAVT GFARDVTDEY
RRERQLAVMD NLLRHTIRND MNIVDGTAER IVDAVAAADA FDPEAWGDSV AAAEGNAEIG
PDALAELGAD LQEHAETIRR IASDLLATAE KQRGVIDLLR QRGSPRAVEV APVVEEALGM
VVDDCDETVD VTYREPVDGE GAREGEPGDE TENVDGMASE ETAGEGTTNE ETAGEETAGD
NSTLPRVSVS YPPNAKAFTH PELDYAIAEL VENALEHAES TPRIRIDVCT TDESIEVSIR
DNCPPIPVEE RYVITDRWEM DDLRHTGGMG LWLVYWVANR SGGDLTFDTH ADGNVVTLSV
PNAKCGTINE DPRETTLSNR PMTAAVEGAD TRIRTDGSTT SEPKRRDETD
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