| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0314 |
|---|
| Symbol | |
|---|
| ID | 7399704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 335264 |
|---|
| End bp | 336373 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643707376 |
|---|
| Product | Protein of unknown function DUF373 |
|---|
| Protein accession | YP_002564988 |
|---|
| Protein GI | 222478751 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2237] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.141585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTCG TCCTCTGTGT CGACCTCGAC GACGACCTCG GCCGGAAGAC GGGGATCCCC
ACTCCCGTCA TCGGTGCCGA CGACGTTACC GAGGCCGCGG TCGCGCTCGC GACCGCCGAC
CCGGAGGACT CCGACGTGAA CGTTCTCTTT CAGGGTGTCA ACGTCCATGA CGAGTTGGCG
GCCGGCGGCG AGGCGGTCGA GGTCGCGGCG GTCACCGGCG TCGACGGCTC CGACGTGAAG
GCGAATCGCG CAGTGGGTCA GGAGGTCGAC CGCGTGCTGG CGGAGCTATC GACCGGCGAG
GAAGTCTCGG CAGTCGTCAT CACCGACGGC GCGCAAGATG AGTCGGTGCT CCCGGTGATC
CGCTCGCGAA TGCCGATCGA CGGGATGCGT CGGGTGGTCG TGCGGCAGGC GCAGGACCTC
GAATCGCTTT ACTACACGAT CAAGCAGGTG CTCGCAGACC CGGAGACCCG TGGCACGATT
TTGGTGCCGC TCGGCGTGCT CCTTTTGATC TACCCGCTCG TCGTCGTCGC CAACCTGTTC
GACATCGCGG GCGCGGCCGT CCTCGGGATC CTCTCCGGAG TTGTCGGGCT CTACTCGCTG
TTCCGTGGGC TCGGGTTGGA GGAGACGATC GACGGCGCGG CCGCGTCCGT CCGCAACGTG
CTCTACACCG GCCGGGTGAC GCTCGTCACC TACGTCGTCG CGCTCGCGCT GATCGTCGTC
GGCGGGGTTC AGGGGATGGA CACGATCGAG ACTGTCCGTA GCGTCCGCGG CGGGGGCGTC
ACCGTCGGCA TCGCGCTCGC GGCGTTCGTC CACGGCTTCG TCCAGTGGCT CGCGGTCGCC
GGGGTCACCT CCAGCCTCGG TCAGATAACC GACGAGTACC TGGCTGGCCG GTTCCGATGG
CGGTACCTCA ACGCGCCCTT TTACGTGCTC TCGATCGCTG TCGTGCTGTA CGCCGTCTCC
GGGTTCTTCC TGCCGGCGGC CCCGGGCGTG ACGTCGCTCG GACTCCCCGA CCTCGCGATG
GCGCTCGCGG CCGGGACGCT CACCGCCGTG TTGAGCACGC TCGCGTTCGC AGTTGCGGAG
TCACAGCTCC CGTCAGCGGA TCCGACGTAA
|
|---|
| Protein sequence | MLLVLCVDLD DDLGRKTGIP TPVIGADDVT EAAVALATAD PEDSDVNVLF QGVNVHDELA
AGGEAVEVAA VTGVDGSDVK ANRAVGQEVD RVLAELSTGE EVSAVVITDG AQDESVLPVI
RSRMPIDGMR RVVVRQAQDL ESLYYTIKQV LADPETRGTI LVPLGVLLLI YPLVVVANLF
DIAGAAVLGI LSGVVGLYSL FRGLGLEETI DGAAASVRNV LYTGRVTLVT YVVALALIVV
GGVQGMDTIE TVRSVRGGGV TVGIALAAFV HGFVQWLAVA GVTSSLGQIT DEYLAGRFRW
RYLNAPFYVL SIAVVLYAVS GFFLPAAPGV TSLGLPDLAM ALAAGTLTAV LSTLAFAVAE
SQLPSADPT
|
|---|
| |