| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0307 |
|---|
| Symbol | |
|---|
| ID | 7399697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 329311 |
|---|
| End bp | 329907 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643707369 |
|---|
| Product | ribonuclease H |
|---|
| Protein accession | YP_002564981 |
|---|
| Protein GI | 222478744 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0328] Ribonuclease HI |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.483531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.133717 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACGA TCGACTGCGA TCCGGCGACC GCGCGGGCCC ATCTGGAGGA CGCCGGCGTC
CGGATCGACG ACGGAAATAC CGCCCACGAG CGGTGGCGCG CCGAGCGCGA AGGCGCCGTC
GCTGTCGCGT ACGACGACAA GGTTGTCGTG CAGGGAAGCG ACCCGACCCG CCTGACAGCC
CTGTTAAGCG AGGGTGGCGG GCGCGCGCAC GTCTACTTCG ACGGCGCCTC GCGCGGGAAC
CCCGGTCCGG GCGCGGTCGG GTGGTGTCTG GTCACCGCGG ACGGAATCGT GGCCGAGGGC
GGCGAGCGGA TCGGCCGCGT CACCAACAAT CAGGCCGAGT ACGCCGCGCT GATCCGGGCG
CTTGAGGCCG CCGACGAGTA TGACTTCGAC GAGATCGACG TTCGCGGCGA CTCCCAGCTG
ATCGTCAAGC AGGTGCGCGG AGAATGGAAC GCCAACGACC CCGAACTCCG CGAGCGGCGG
GTCCGCGTCC GAGAGCTGTT AGAGCGGTTC GACCGATGGT CTATCGGCCA CGTTCCGCGA
GAGATAAACG AACGCGCCGA CGATCTGGCG AACGAGGCAC TCGATGACGC GAACTAA
|
|---|
| Protein sequence | MPTIDCDPAT ARAHLEDAGV RIDDGNTAHE RWRAEREGAV AVAYDDKVVV QGSDPTRLTA
LLSEGGGRAH VYFDGASRGN PGPGAVGWCL VTADGIVAEG GERIGRVTNN QAEYAALIRA
LEAADEYDFD EIDVRGDSQL IVKQVRGEWN ANDPELRERR VRVRELLERF DRWSIGHVPR
EINERADDLA NEALDDAN
|
|---|
| |