Gene Hlac_0280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0280 
Symbol 
ID7401206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp303325 
End bp303654 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content66% 
IMG OID643707343 
ProductV-type ATP synthase subunit F 
Protein accessionYP_002564955 
Protein GI222478718 
COG category[C] Energy production and conversion 
COG ID[COG1436] Archaeal/vacuolar-type H+-ATPase subunit F 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.231884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGG AGATCGCCGT CGTCGGGAGC CCGGAGTTCA CGACTGGATT CCGGCTCGCC 
GGCGTGCGGA AGTTCGAGAA CATACCGGAC GACGAGAAGG ACGAGCGGCT CGACGATGCC
GTCGAACGGA CCCTCGACGA CGAGGGAACC GGCATCATCG TGATGCACAC CGACGACCTC
GACCATCTCT CGCGGGGGAC CCGCGAAGCG GTCGAGGGAA GCATTGAGCC CGTGCTCGTG
ACGCTCGGCG GATCCGGCGC CGGCAGCGGC GGGCTGCGCG ACCAGATCAA ACGAGCCATC
GGGATCGACC TGATGGAGGA GGACGACTAA
 
Protein sequence
MSQEIAVVGS PEFTTGFRLA GVRKFENIPD DEKDERLDDA VERTLDDEGT GIIVMHTDDL 
DHLSRGTREA VEGSIEPVLV TLGGSGAGSG GLRDQIKRAI GIDLMEEDD