| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0258 |
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| Symbol | |
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| ID | 7401184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 278039 |
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| End bp | 279457 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643707321 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002564933 |
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| Protein GI | 222478696 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.209845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTG ACGGCGAGTC GACACCCCGC GTGGTGCAAT CGTTCGTCGA GGCGGTTCCG
ACGCCGGCGG TAGCCTGCGA TCCCGAGACG CACGCGATCC GGGCGGCGAA CGCCGCGGCG
GCCGCGCTGC TCGGGCAGGA CCGCAGGACG TTGACCTTGA TGGGACTCAC CGACCTCGGC
GAGGCCGACG AGACGGTCGA CGGCGAGCCG GTAGCCGCGG CAGTTGACGA GGCGATCGAC
CGAGAGGGAG TTACCGAGCT CGAGTGGGAG ACCGGTGGGG AGTGGGAGCG GCGCCGGCTC
TCGCTTTCCC TCCACACGAC GACGATCGCC GACGAGCGGT GGCTGATCGT CGGGTTGACC
GACGTGACCG ACCGCGTCAC TGCCGAGGAG GAACTCCGGT CGCAGCAGCA CGTCGTCGAC
GCCATCGCTT CGACGATGCC CGCCGCGCTG TTCCAGTGTA GCGCAGACGG GACGCTCGCA
CGGTGGAACG ACCAGCTCGC CGCTGACACC GAACGCGATG GCGAGGAGCT ATCCGGGACC
GACCTAACAG CGCTGTTCGA TGACGAGACT CGCGATACCG TCGCCGAGGC GCTTCGCCGC
GTGTACCGCG AGCGCGAACC GGCCGAGTGC GAGGCGACGC TTTTCACCCG GTCGGGCGAG
CGCGTCCCGT ACCAGCTCGC GCTGGGGCCG GTCGTCGACG GCGACGAGCT CGTCGGCGCG
ATCGGCGTCG GCGAGGATCG CACGGAAGCG TCGCTCCGCG AGGAGCGGCT TGCCGTTCTG
GCGCGGGTGC TGCGGCACAA CTTCCGAAAC GATCTCAACG TGGTGACCGG GTTCACCGAG
CGGGCTATCG ACACCGTCGA CGACCCGGAG CTGGCGTCGG AGCTCGAACG AGTCGTCGAT
ACCGCCGAGC GCCTGCTCCG CGTGGGCGAG ACCTCCCGGC GCGTCGAGCG GCTTCTCGCC
GATCGACCCG CACCCAGCCG GATCGACCTC GACAACGCCG TCGATGAGGC GCTCGTCTCG
CTCCCGTCGG AACTCCGCGA GGGCGCCGAC ATCGAGGTCG ACGTGCCCGA GGGGATCACG
GTGTCGGCGA TCGGCTACCT CGCCGAGGCG ATCGCGGAGC TCGTCGAGAA CGCGATCCGC
CACAGCGACA CCGAGCGCTC ACGTGTCGAG ATCACGGCCG CCGAACTTCC GAGCGAGTCG
TGGACCTCGC TCGTCGTCGC CGACGACGGG CCGGGGATTC CCCCAACCGA GCGGTCGGTA
CTCACCGGCG AGGAGACGCC GCTGGAGCAC GCGAGCGGGC TCGGTCTCTG GTACGTCAAC
TGGATCGTCA GCGCCGGCGG TGGATCCTTC GATATCAGCT CCGCATCGGC CGGCGGGACA
CGGATCGAGA TGGAGCTCCG GACGCTGGAC GACGGGTGA
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| Protein sequence | MDRDGESTPR VVQSFVEAVP TPAVACDPET HAIRAANAAA AALLGQDRRT LTLMGLTDLG
EADETVDGEP VAAAVDEAID REGVTELEWE TGGEWERRRL SLSLHTTTIA DERWLIVGLT
DVTDRVTAEE ELRSQQHVVD AIASTMPAAL FQCSADGTLA RWNDQLAADT ERDGEELSGT
DLTALFDDET RDTVAEALRR VYREREPAEC EATLFTRSGE RVPYQLALGP VVDGDELVGA
IGVGEDRTEA SLREERLAVL ARVLRHNFRN DLNVVTGFTE RAIDTVDDPE LASELERVVD
TAERLLRVGE TSRRVERLLA DRPAPSRIDL DNAVDEALVS LPSELREGAD IEVDVPEGIT
VSAIGYLAEA IAELVENAIR HSDTERSRVE ITAAELPSES WTSLVVADDG PGIPPTERSV
LTGEETPLEH ASGLGLWYVN WIVSAGGGSF DISSASAGGT RIEMELRTLD DG
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