Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0240 |
Symbol | |
ID | 7401166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 258693 |
End bp | 259361 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643707303 |
Product | NADPH-dependent F420 reductase |
Protein accession | YP_002564915 |
Protein GI | 222478678 |
COG category | [R] General function prediction only |
COG ID | [COG2085] Predicted dinucleotide-binding enzymes |
TIGRFAM ID | [TIGR01915] NADPH-dependent F420 reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.745076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.341645 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG CGATACTCGG CGGCACAGGG GATATCGGAC AAGGCCTCGC GCTTCGGCTC GCAGCTGACA CCCATCACGA GGTCACCATC GGCTCGCGCG ACGCAGAGCG GGCGGAGACC AAAGCCGAGG AGTACACCAC CGAACTCGAC AGTCGCGGCC TCGACGCGAC GGTGGCGGGC GCCGAGAACG AGACCGCCGC CGCTGCGGCC CGAGTCATCG TACTCGCGGT CCCACCGTAC CACGTCGGCG ACACCGTCGA GGCGATCGCC GATACGCTCG ACGAGGGTGA CGTGCTCGTC TCGCCCGCGA CCGGGATGAA ACGCGACGAC GAAGGCTTTC ACTACCACCG GCCCGGCGCC GGCTCAGTGA CGCGGATCGC CGCGGACGCT GCACCCGATG GGGTCGACGT CGTGGGTGCG TTCCACAACC TCGCGGCCGC TCGCCTCGCG AACCTCGACG CCGACCTCGG GATCGACACG CTCGTGATCG GTGACGACGA GGACGCGAAG GGGACCGTGA TCGACGTCGC CGAGGGAATC GAGGGACTGC GTGCGCTCGA CGCCGGAGGC ATCGCCAACG CGCCGGAAAT CGAGGGACTC ACGCCGCTTC TAATCAACGT CGCCGAGAAC AACGACGGGC TCAACGACCT CGGGATCAAG TTTACATAA
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Protein sequence | MKIAILGGTG DIGQGLALRL AADTHHEVTI GSRDAERAET KAEEYTTELD SRGLDATVAG AENETAAAAA RVIVLAVPPY HVGDTVEAIA DTLDEGDVLV SPATGMKRDD EGFHYHRPGA GSVTRIAADA APDGVDVVGA FHNLAAARLA NLDADLGIDT LVIGDDEDAK GTVIDVAEGI EGLRALDAGG IANAPEIEGL TPLLINVAEN NDGLNDLGIK FT
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