| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0223 |
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| Symbol | |
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| ID | 7402152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 241440 |
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| End bp | 242231 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643707286 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_002564898 |
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| Protein GI | 222478661 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.191938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0226189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG ACACCACCCT GACGCCGGAC GACTCCCTCC CGGACCTCAC CGGGCGGGTC
GCCGTCGTCA CCGGCGGCGG CCGGGGGATC GGACGAGCGA TAACCCTCGG GATGGCCGCC
GCGGGAGCGA CGGTCGTCCC CTCGGCGCGG ACCGCGGCCG AGGTCGAGGC CGTCGCCGAC
GAGGCCCGCG ATTTCGGCGT CGAAGCGCGC GGTATCACTG CCGACGTGAC CGACGACGAC
GACGTAGAGG CGCTCGTCGA GGAGATCGTC GACGCGTTCG GCTCCCTGGA TATTTTGGTC
AACAACGCCG GATTCAACCC CGGCGACGCG CTCGGCGACC CAGCGGAAAT CGAGAGCGAC
GCCGTCGATT CGGTCTTGGA CGTGAACCTT CGAGGGGCGT TCCGAACTCT CCGAGCCGCC
GGCCCGCACC TGAAGGAGGC TGGCGGGAGC GTCGTCAACG TCGCCAGCGT GGCGGGAGAG
GTCGGCCTCC CGAAACAGCA CCCGTACGTC GCCTCGAAAC ACGGCCTCGT CGGGCTCACG
AAGAGCGCGG CGATGGACTG GGCGCCTGAG GTGCGGGTGA ACGCGGTCGC CCCGGGCTAC
GTCGCGACCG ACCTCACGGA GACGCTACAG GAGAACGAGC GGCTTCGGCA GTCGATCCTC
GACCGGACAC CCCTCGATCG CTTCGCCGAT CCGATGGAGA TCGCGGGACC GGCCGTCTTC
CTCGCGAGCG ACGCGGCGAG TTTCGTCACC GGCGAGACGC TCGCCGCCGA CGGCGGCTGG
ACGGCGCGGT AG
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| Protein sequence | MTEDTTLTPD DSLPDLTGRV AVVTGGGRGI GRAITLGMAA AGATVVPSAR TAAEVEAVAD
EARDFGVEAR GITADVTDDD DVEALVEEIV DAFGSLDILV NNAGFNPGDA LGDPAEIESD
AVDSVLDVNL RGAFRTLRAA GPHLKEAGGS VVNVASVAGE VGLPKQHPYV ASKHGLVGLT
KSAAMDWAPE VRVNAVAPGY VATDLTETLQ ENERLRQSIL DRTPLDRFAD PMEIAGPAVF
LASDAASFVT GETLAADGGW TAR
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