Gene Hlac_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0220 
Symbol 
ID7402149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp238418 
End bp238948 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content60% 
IMG OID643707283 
Productputative transcriptional regulator, AsnC family 
Protein accessionYP_002564895 
Protein GI222478658 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0765928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0113612 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA AACAGCCGAT CCCGGACTGG AACCTCTCCG AGCGGGACAC CATCATCCTT 
CAGGAGCTCG CTCGGGACCC TCAGCTCACC TCGCGCGGGC TCCGCGATCT CCTCGCCGAG
GAACACGATA TCGACGTCTC GCACGTCACC GTCAACGAGT CGATCCGGCG GATGCGCGCC
GACGGGGTGT TCCGAGAGGC GTTGGTCCCC AACGAGGAGC ACCTCTTCTT CTCGCTGTTC
GAGTTCCAGT TCAACCCGGA AGGGTTCGAC GAACACTGGG AAGACGCTCT CGAACACATC
CGGTCGAGCC GCCACACGTT CATGTATTTC CTCTCTGACG GCGACTACCA GTGGAAGACG
ATCATGATGT TCGAGGACCG CGAACAGGAG TCGAAGTGGA TCCACGAGTT CTACAAGGAG
TACGGCGTGC TCGTCAACAA CCTCCGCAAC TCCGTCGTGA CGAACGTCCT CAAGTTCGGG
ACGGATCCCG AGCTGTTCGA GGTGTTCCAG GAGGACGGCA ACGACGAGTG A
 
Protein sequence
MPEKQPIPDW NLSERDTIIL QELARDPQLT SRGLRDLLAE EHDIDVSHVT VNESIRRMRA 
DGVFREALVP NEEHLFFSLF EFQFNPEGFD EHWEDALEHI RSSRHTFMYF LSDGDYQWKT
IMMFEDREQE SKWIHEFYKE YGVLVNNLRN SVVTNVLKFG TDPELFEVFQ EDGNDE