Gene Hlac_0206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0206 
Symbol 
ID7402135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp221245 
End bp221781 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID643707269 
Productthioesterase superfamily protein 
Protein accessionYP_002564881 
Protein GI222478644 
COG category[I] Lipid transport and metabolism 
COG ID[COG1607] Acyl-CoA hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.627251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTCTCCG ACACTATCGA TTTCGTCGTC GATGGCTCTC CCTTCACCGC CGACGGCCCT 
TTCAGCGCCG GACGTGTGGG GACCGGTATG CCGACCGTCA GCGACACCTA CATCGAGAAC
CGTCAGCGGG TCCAGCCGAC CCACACCAAC AACTACGAGT CGGCTCACGG GGGCAACGTC
GTCAAGTGGA TGGACGAAAT CGGCGCGATG TCGGCGATGC GCGCCGCCGG CGAGACGTGC
GTCACGGCCA AGATCAACGG GCTCGACTTC AAGCGGCCGG TGCCACAGGG CGACACCTGC
ATCGTCGAGT CGTACGTGTA CGCGGTCGGA CGAACGAGCC TCCGCACGCG GATCCGCGCG
TACCGCGAGT CCCCTCGGAC CGGCGAGCGC GAGTTGACGA CCGAGTCGTA CTTCGTGTTC
GTCTCCGTCG ACGCCGACGG GACCCCGACG CCGGTGCCGG AGCTGACGGT GGAGGGGGAC
CGCTGCCGGG AGCTCCGCGA CGCCGCGCTC GCTGCCGAGC CCGACGAGGA GCGCTGA
 
Protein sequence
MLSDTIDFVV DGSPFTADGP FSAGRVGTGM PTVSDTYIEN RQRVQPTHTN NYESAHGGNV 
VKWMDEIGAM SAMRAAGETC VTAKINGLDF KRPVPQGDTC IVESYVYAVG RTSLRTRIRA
YRESPRTGER ELTTESYFVF VSVDADGTPT PVPELTVEGD RCRELRDAAL AAEPDEER