| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0203 |
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| Symbol | |
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| ID | 7402132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 218701 |
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| End bp | 220545 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643707266 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_002564878 |
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| Protein GI | 222478641 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.451743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC CCACGGTGAC GCGACTGTTC GGCGGTCCGG GCAGCGGGAA GACCACGGCG
CTCCTGGACC GCGTCGAGGG GATCCTCGAC GACGGGGACG CCGACGTCCG TGACGTGCTC
GTCGTCTCGT ACACGCGCGC AGCCGCCGCC GAGATCCGCG AACGACTCGC AGAGCGGCTC
GACATCTCCC CGCGCAGCCT CCAGGGGAAC GTCTGTACCA TGCACGCGAA GGCGTACGAG
CTGCTCGATC TGTCGCGCGG CGACGTGGTC GGCGAGGACG ACAAAGAGGA GTTCTGCGAG
GAGTACGGCA TCGAATTCGA GGACCAGCAC GGCGGCGCCG GGCGGCGGAC CGCGCGGTCG
ACGACGATCG GTAACAAGAT CATCGCCACC TCGCAGTGGC TCCAGCGCAC CGAGCGTGAC
GTGTCCGACT GGTACGACGT GCCCTTCCAG TGGGACGTCG AGGAGGTTCG GCTCCCGCCC
GAGGAGGACC CCAACGCTCA GGAAGGGAAC AAGTACACCC CGACGTGGCC CTCCGACGAC
GAGCGGATCG ACATCCCCGA GACGATCCGC GCGTGGCGCG GCTACAAGGG CGACAACGAT
CTGGTCGGCT TCGCGGACAT GCTCGAACGC GTCGCGCAGC GCTCGCTGGT GCCGAACGTC
GACTACCTGA TCATCGACGA GTTTCAGGAC ATCACGACGC TGCAGTACAA CGTCTTCGAG
GAGTGGGAAC CGCACATGCG GAAGGTGCTC ATCGCCGGCG ACGACGACCA GGTCGTCTAC
GCGTGGCAGG GCGCCGACCC CGACCTCCTC TTGGACACCG ACGTCGACGA GGACGTGGTC
CTCCCGAACT CCTACCGGCT GCCCTCCGAG ATCCTCAACG TCGTCAACGC CGAGATCCGT
CACATCGACA AGCGGCAGGA GAAGGACCTC CACCCCCGCA AGGAGGGCGG CAGCGTCGAA
GCGATCCAGT CGCCGTCGAT GCTCGAACTC GTCCGGAACG TCCGGTACAC CGTCGATGAC
GACGAGGGCA GCGTGATGTG TCTGTTCCGC GCGCGCTACC AGATGTTCGA CTTCATCGAC
GAGTTCATCG ACCACGGGAT CCCGTTCACG ATGCTGACCG ACGGCCGGAT GTGGACGGAC
CGCGTGCAGG ACTACGTCAG CGCCATCGAG AAGTCCGACG CGGGCGATCC CGTGAACGGA
CTGGAAGCCC GGCGGCTCGC GGACATGCTG CAGGACTCGG CGTTCGGCAC CCACGAGCGC
GACGAGTTCT ACGACTTCCT CGACGACCGC GAGGAGGCGG CCGACGCCGA CGACATCTCG
CTCATCGAGG TGACGACCGA CGAGCTCGAC GCCCACATCC CGTTCATGCC CGACGCGAAC
AGCGCCGACG ACATGGTCCG GAAGGTGACG AGCTTCCAGC GGAAGTCGAT GGGCGCGTAC
TTCGGCGGCG ACTACGAGGG GGCGGACCCG ACCCGCGTCC GCGTCGGCAC TATCCACTCC
GCGAAGGGCC GCGAGGCCGA TCACGTGTTC GTCGCGACGG ATCTCACCGA GAAGGTGGTC
GAGCAGATGG CCGCCTCCAT CGACGACCCG ACCGACGTGG ACGGCATCGA GGAGTTCACG
AAGACCACGA GCCCGGTCCC CGTCCTCACC GACAACGAGC GCCGGGTCTT CTACGTCGGG
ATGTCCCGCG CCCGCGAGCG GCTCGTGATC ATGGAGAGCC TCATCAGTGG GGCGCCGACG
CTCCCGATCA GCGTCCTGCT CTTTAACGAA CTCCGCGACG AGCCCGCACA GGAGCTCGTC
GATGAGGTGC AGGCAGAGCT GGCCGTCCCC GAACCCGAGC CGTGA
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| Protein sequence | MTDPTVTRLF GGPGSGKTTA LLDRVEGILD DGDADVRDVL VVSYTRAAAA EIRERLAERL
DISPRSLQGN VCTMHAKAYE LLDLSRGDVV GEDDKEEFCE EYGIEFEDQH GGAGRRTARS
TTIGNKIIAT SQWLQRTERD VSDWYDVPFQ WDVEEVRLPP EEDPNAQEGN KYTPTWPSDD
ERIDIPETIR AWRGYKGDND LVGFADMLER VAQRSLVPNV DYLIIDEFQD ITTLQYNVFE
EWEPHMRKVL IAGDDDQVVY AWQGADPDLL LDTDVDEDVV LPNSYRLPSE ILNVVNAEIR
HIDKRQEKDL HPRKEGGSVE AIQSPSMLEL VRNVRYTVDD DEGSVMCLFR ARYQMFDFID
EFIDHGIPFT MLTDGRMWTD RVQDYVSAIE KSDAGDPVNG LEARRLADML QDSAFGTHER
DEFYDFLDDR EEAADADDIS LIEVTTDELD AHIPFMPDAN SADDMVRKVT SFQRKSMGAY
FGGDYEGADP TRVRVGTIHS AKGREADHVF VATDLTEKVV EQMAASIDDP TDVDGIEEFT
KTTSPVPVLT DNERRVFYVG MSRARERLVI MESLISGAPT LPISVLLFNE LRDEPAQELV
DEVQAELAVP EPEP
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