Gene Hlac_0202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0202 
Symbol 
ID7402131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp217406 
End bp218704 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content73% 
IMG OID643707265 
Productpeptidase M24 
Protein accessionYP_002564877 
Protein GI222478640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0006] Xaa-Pro aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.736579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACG GGAGCGACGA CGCCGATTCG CGCGATCGTC TCCCGCTCCG CACCGATCTC 
ACCCCGATCG TCGAGGCGGT CGCGGCCGCG GACGCCGACG CGTTCGTCAC GGTCGGCGAT
CGGTTCGACG ACGACCTTCG GTACCTCACG CGCTTTTCCG GGCCGGACCG AGCGTACGCG
CTGGTGATCG TTCCGGCCGA CGACGCCGGG GGCCGCGCCG TCTGCTGTGC CCCGTCGCTG
TTCCGCGAAC AGGCCGAACG TGAGTTCGTC GCGAGCGCGC GCAGTCGAAG TGCCGACGAC
GGCGGTTTCC ACGACGGCGT CGCTCGCGAG GTACGGACCG AGCGCGTCGG CAACCACGCT
GGCGAGCGCG CGGCGGCGGT CATTCGCGAC CTGCTCGGCG GCGAGGACAG CGAACCCACC
CTGCTCGTCC CCCCGTCGAT CCCGCACGAC GCGGCGGTGT ACCTGGAACG CGCCGGCAAC
GCGCTCGCGT CGACCAACGC GGTCGCGAGG GCGCGAGCGC GGAAGACCGA CGCCGAGATC
GACCGGCTCC GCCGCGTCCA GTGCGCGGCG GTCGCGGGGA TGGCACGCGC GGAGACCATG
TTGGCTGAAA GCGAAGTCGT CGAGGTGGAA TCCGTCGAGG ATACCGACAC AGAACGCAGG
CCCGCCCTCC GCTGGGAGGG CGCCCCCCTG ACGACCGAGC GGCTGCGGCG AGCGGTGAAC
GCGACGCTCG CCGACCGCGG CGTCCGCGAC GCCGGCGACA CCGCGATCGG CGCCGGCCCG
TCGGCGGCCG ACCTCCACTA CGTCGGCGAC GACCCGATCC GGCCGGGCGA GACGGTGCTG
ATCGACATCT CGCCGCGCGG GCCCGACGGG TACCGCGGCG ACCTGACCCG GACGTTCGTC
GTCGACGGCG ACGGCGGCTG GGAGCGTCGG GCGTACCTCG CGGTCGAGTC GGCCCGAGAG
GCCGCGCTCG CCGAGATCGA GCCGGGCGTC CCGACTAAGA CCGTCCACGG CGAGGCCGCC
GCCGAGCTGG CCGCGTACGG GTTCGACCCG AACGCGGGGG AGGGCGAGGC CGGGTTCACT
CACGGCGCCG GCCACGGCGT GGGAGTGAGC CTCCACGAGT CGCCGTCGCT GTCGGGTGCG
GGCGAACTGC GACCGGGCCA CGTCGTCACG GTCGAGCCCG GCGTCTACGA CCCGGACGTC
GGCGGTGTCA GACTGGGGGA CCTCGTCGTC GTCACCGAAG ACGGGTACGA GGTGCTGGCC
GAGTACCCGT TCGGGATCGT GCCGAACGAG CGCGAGTGA
 
Protein sequence
MNDGSDDADS RDRLPLRTDL TPIVEAVAAA DADAFVTVGD RFDDDLRYLT RFSGPDRAYA 
LVIVPADDAG GRAVCCAPSL FREQAEREFV ASARSRSADD GGFHDGVARE VRTERVGNHA
GERAAAVIRD LLGGEDSEPT LLVPPSIPHD AAVYLERAGN ALASTNAVAR ARARKTDAEI
DRLRRVQCAA VAGMARAETM LAESEVVEVE SVEDTDTERR PALRWEGAPL TTERLRRAVN
ATLADRGVRD AGDTAIGAGP SAADLHYVGD DPIRPGETVL IDISPRGPDG YRGDLTRTFV
VDGDGGWERR AYLAVESARE AALAEIEPGV PTKTVHGEAA AELAAYGFDP NAGEGEAGFT
HGAGHGVGVS LHESPSLSGA GELRPGHVVT VEPGVYDPDV GGVRLGDLVV VTEDGYEVLA
EYPFGIVPNE RE