| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0194 |
|---|
| Symbol | |
|---|
| ID | 7402123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 209219 |
|---|
| End bp | 211045 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 643707257 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002564869 |
|---|
| Protein GI | 222478632 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.6206 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGGTC CGGATAGCGA TCTCGACGGC GCTGCGCGAC GCAGTGCGAC GGACGACGGT
GAGGGGTCGG CCGAGCTCCG TCGAGCGATC GCGTTCCTCG GATGGGAGGC GACGAGCGCG
CGTGTGATCG AAACGGGATA TTGGGCCGGC GTGGGAGTCG GTCTCACCTG CGCCGTCGTC
GTCGCGTTCG TCTCTGGACC CGTTCCCGGC TTGTTGTCCG GACTGGCGGG CGGTCTCGGA
GCCACGCACA TCGCCCATCG GGGCCCAGTG TGGCTTGCCT CGCTCCGGCG GACCAGAGCG
CTCGGGGCCG CGCCCGGACT CGTCGGACGG CTCGTGTTGC GAATGCGGTT GGACCCGTCG
ACGGAGCGTG CCGTTCGATT CGCCGCACGG ACTGGCGACG GACCGCTGGC CGACGGCCTC
GCGCGCCACG AGCGAGCGAA CACCGATGGA CCGACCAGCG GGCTCCGGGC GTTCGCCCGC
GAGTGGCAGC CGTGGTTTCC GGCCATCGAT CGGGCAGCGG CGCTCGTCCG AACGGCGGCA
TCAGCGCCGC CCGAGCGTCG AGGGCGGTGT CTGGACCGCG CGCTCGATGC AACAATTTCC
GGAACGACGG ACCGACTTGC CGCCTTCGTC GGGGAAGTCC GCAGCCCCGT CTCGGCGCTG
TACGCGTTCG GGGTGTTGCT TCCCCTTGCG CTCATTGCTC TCCTTCCGGC GGCTGCCGCG
ACGGGCGTCC CAATCGGTCC CGGCGTCGTC GCGGCGCTGT ACCTCGGCGT GCTGCCGGCG
GGACTGCTCG CGGCGTCGGC ATGGCTGCTC TCCCGTCGCC CGGTCGCGTT CGCGCCCCCG
AGTATCGACG AAGACCACCC GGATGTCCCG GAGAGAGGAA CTCACGCCGC GGTCGCCGGA
TTGGGAACCG GAGCCATCGC CGCCGTCGTT ACAGCGCGGT TCGTCTCCGG ATGGGCCGCT
CCGGTCGCAG GGGTCGGCGT CGGAGCCGGC GTCGCGCTGT TCGTTGCCGT TCACCGCCGC
AGAGCGGTGC TGTCGAACGT CCGTGCCGTC GAGCGCTCCC TCCCAGACGC GATGACGGTG
ATCGGCGGCG ACGTGGCCGA GGGCGTCGCC GTCGAGACCG CAATTGCGAA CGCCGGCGAA
CGACTCGACG GCGCCACTGG GGAGCTGTTC GAGCGCGCTG GACGGCGGAG CGACACGCTC
CGCGTCGACG TTCGGGAGGC GTTCCTCGGC CGGGGCGGTC CGGCGGTTCC GGTTCCGTCG
CCGCGGGTGC AAGGCGCGGT CGCGCTGCTC GCCGTCGCCG GGCGTGAGGG GCGTCCCGCG
GGCGACGTGC TGCTCGAACT CGCCGACCAG TTGGAGGAGC TGCGCGAGCT CGAAAACGAT
GCGCGACGAC AGCTCGCGAC CGTGACGGGA ACGCTGACGA ACACCGCGGC GGTGTTCGCG
CCGCTCGTCG GCGGGGCGAC AGTCGCGTTG GCCACCGGAA TCGACGCGGT CGACGCTGGG
GGACTCGGCG CCGGAGCGAC GGCCGGCGCA GACGCGCTCG GCGGTGCCGG TGGTGTCGGT
GACCCGGGCA CAGTCGGTGC CGAAGCGAGC GGAACGACGA GCGGGGCGGG TGCAAAATCG
GACAGCGCCA GCGCACTCTC GGTGCCCGTG CTCGGACAGA TCGTCGGCGC GTACGTGTTG
ATCCTCGCGG CGCTGCTCAC TGCGTTAGCG ACAGGACTCG AACGCGGGTT CGACCGGACC
CTCGTCGCCT ATCGGGTTGG AATCGCGCTC CCGACCGCGG CCGCGACGTA CCTCGTCGCT
TTCCTCGGTG CCGGACTGCT GCTGTAG
|
|---|
| Protein sequence | MTGPDSDLDG AARRSATDDG EGSAELRRAI AFLGWEATSA RVIETGYWAG VGVGLTCAVV
VAFVSGPVPG LLSGLAGGLG ATHIAHRGPV WLASLRRTRA LGAAPGLVGR LVLRMRLDPS
TERAVRFAAR TGDGPLADGL ARHERANTDG PTSGLRAFAR EWQPWFPAID RAAALVRTAA
SAPPERRGRC LDRALDATIS GTTDRLAAFV GEVRSPVSAL YAFGVLLPLA LIALLPAAAA
TGVPIGPGVV AALYLGVLPA GLLAASAWLL SRRPVAFAPP SIDEDHPDVP ERGTHAAVAG
LGTGAIAAVV TARFVSGWAA PVAGVGVGAG VALFVAVHRR RAVLSNVRAV ERSLPDAMTV
IGGDVAEGVA VETAIANAGE RLDGATGELF ERAGRRSDTL RVDVREAFLG RGGPAVPVPS
PRVQGAVALL AVAGREGRPA GDVLLELADQ LEELRELEND ARRQLATVTG TLTNTAAVFA
PLVGGATVAL ATGIDAVDAG GLGAGATAGA DALGGAGGVG DPGTVGAEAS GTTSGAGAKS
DSASALSVPV LGQIVGAYVL ILAALLTALA TGLERGFDRT LVAYRVGIAL PTAAATYLVA
FLGAGLLL
|
|---|
| |