Gene Hlac_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0149 
Symbol 
ID7401670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp155576 
End bp155995 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content70% 
IMG OID643707212 
Productprotein of unknown function DUF296 
Protein accessionYP_002564824 
Protein GI222478587 
COG category[R] General function prediction only 
COG ID[COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCATC GGGAAGTCGA GTCGACGGCG GAGTACGTCG CGCGGTTCGA GACGGGCGCC 
GACTGGCGCG AGGAAATCGA GGACCTCGCC CGCGCGGAGG ACGTCGAGGC GGGCTGGTTC
ACGGCGCTCG GGGCCGTACA GGACGCGGAG GTGTGGTTCT ACGACCAGGA TGAGACAGAG
TATCAGTCGG TGACCTTCGA CGAGCCGCTG GAGGTCGCGG CCTGCGTCGG CAACGTCTCG
CTGCTCGACG GCGACGTGTT CGCGCACACG CACGTCGTGC TGTCGCGACC GAGCGGACAG
GCGCTCGCGG GCCACCTCGA CTCTGCGACC GTCTGGGCCG GCGAGTGCCA CCTCCGGGCG
TTCGCGGAGC CGCTGGAGCG CTCTCACGAC GCCGCCACCG ACCTCGACTT ATGGCTCTGA
 
Protein sequence
MHHREVESTA EYVARFETGA DWREEIEDLA RAEDVEAGWF TALGAVQDAE VWFYDQDETE 
YQSVTFDEPL EVAACVGNVS LLDGDVFAHT HVVLSRPSGQ ALAGHLDSAT VWAGECHLRA
FAEPLERSHD AATDLDLWL