Gene Hlac_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0144 
Symbol 
ID7401665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp152741 
End bp153355 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content68% 
IMG OID643707208 
Productputative transcriptional regulator, AsnC family 
Protein accessionYP_002564820 
Protein GI222478583 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGACC TCGACGAGAC GGATTTAGAG ATCCTGTCGC TTCTGGCTGA GGACGCCCGG 
CGCCCATTTA GCGAGATCGG CGACCGGGTT GGGCTGTCGG GACCGGCGGT CTCCGACCGC
GTCACCCGGC TGGAGGAGAC CGGCGTTATC AAGCGATTCA CGGTCGACGT CGATCGGACG
AAGCTCCGCG CCGGGGTTCC CGTTCTGGTG GACGTGGAGC TGCCGGTTGG CGCCGAATCG
ACCGACGGAT CGAACACCCT CGACGCGGCC CGCGAGCGCG TCCGCGACGC CGACGCCGTC
GAGCACCAGT TCGTCACGGC TGAGGGCGAC CTCCGCGTGT ACGCCCGCGT CGAGGGCCGG
AACGTTCGGG AGTGGGTGGT CGGGCTGTTT GAGGGGGTCG GCGTCGAGGA CTACACGGTC
ACGCTGGTCG ACGAGTTCGA GTGGACGCCC TCGATCGAGG GCGTGGAGTT CGCGTTGACC
TGCGCGGAGT GTTCCAACAC GGTCGACAGC GAAGGCGAGA CGGCGCGGAT CGACGGCGAG
GTGTACCACT TCTGTTGTCC GTCCTGCCTG TCGCAGTTCC GGGAGCGGTA CCAGCGGCTG
GAGGAGGGGG CGTGA
 
Protein sequence
MRDLDETDLE ILSLLAEDAR RPFSEIGDRV GLSGPAVSDR VTRLEETGVI KRFTVDVDRT 
KLRAGVPVLV DVELPVGAES TDGSNTLDAA RERVRDADAV EHQFVTAEGD LRVYARVEGR
NVREWVVGLF EGVGVEDYTV TLVDEFEWTP SIEGVEFALT CAECSNTVDS EGETARIDGE
VYHFCCPSCL SQFRERYQRL EEGA