| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0111 |
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| Symbol | |
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| ID | 7401631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 116382 |
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| End bp | 117887 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643707174 |
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| Product | replication factor A |
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| Protein accession | YP_002564787 |
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| Protein GI | 222478550 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.462396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTGA TAGAGGACGT CTACGAGGAT CTCGACACCG ATGTCGAGTT CGAGGAATTC
GAGGCAGCCG TCGAGGACAA AGTGGAGCAG ATGGGCGGAC TCGCCGACGA GGAGACCGCG
GCCATGCTCA TCGCCCACGA GCTGCGCGAC GAGGAGGCCG ACACGATCGC CGACATCGAG
CCCGGCATGA ACGACGTGAA GTTCCTCGGG AAGGTGACCT CCATCGGCGA CATCCGCACG
TTCGAGCGCG ACGACGAGGA CGCCGAGGAG GGCCGCGTCT GCAACGTCGA CGTGGCGGAC
GCCTCCGGCT CCGTGCGCGT CGCACTGTGG GACGATATGG CAGCCGCGGC CGAAGAGCAG
TTGGAGGTCG GACAGGTGCT CCGCGTCATG GGCCGCCCGA AAGAGGGGTA CAGCGGACTC
GAAGTGAGCG CGGACAAGGT CGAGCCGGAC GAGGACGCCG AGGTCGACGT GCAGGTGCTC
GACACCTATC GGGTGGAGGA CCTCTCGCTC GGTGCCTCCG ACGTGGACCT CGTCGGGCAG
GTGCTCGACA CGGACTCGAT CCGCACGTTC GACCGCGACG ACGGCTCTGA GGGGCGGGTC
GCCAACCTCA CCGTCGGCGA CGAGACGGGT CGCGTGCGCG TAACACTTTG GGACGACAAG
GCCGACCTCG TCGAGGAGTT CGAGGCCGGC GAGGTCGTCG AGGTCGGCGA CGGCTACGTC
CGCGAGCGCG ACGGCGACTT GGAGCTCCAC GTCGGCGACC GCGGCACCGT CGAGCGCGTC
GACGAGGACG TGGAGTACGT CCCGGAGACC ACGGACATCG CCGAACTGGA GATCGGCGAG
ACCGTCGACA TCGGCGGGGG CGTCATCGAG ACGGATCCGA AGCGCACGTT CGACCGCGAC
GACGGCTCGG AAGGGCAGGT CCGGAACGTC CGCATCAAGG ACGACACCGG CGAGATCCGC
GTCGCGCTGT GGGGCGACAA GGCCGACCGT GAGATCGAGC TGGCCGACCG CGTCGTCTTC
ACCGACGTGG AGGTTCAGGA CGGCTGGCAG GACGACCTCG AGGCCTCCGC GAACTGGCGT
TCGACGGTCA CCGTCCTCGA CGAAGGGAGC GATGCGGTGG GCGGCGCCTC AGGGTCCGGT
AGCGCCGGGA GCAGCGACGA CGGCGACGCG CACGGGACAA ACAATACCGG GCTCGGCGCC
TTCGCTGGAG ACGAACAGAA GGCGGCCGCC GAGGCCGTCG CCGGCGAGAC CGGCGGAGAC
GGTGGGAACA GCGGGGTCGG CGGCGGGAAC GGTGGATCCG GCGGCGCCGC GACCGCGACA
GCGGAGCAGT CGGCCGAAGA GATCGAGTTC ACCGGGACAG TCGTCCAGAC CGGCGATCCT
GTCGTGTTGG ACGACGGCCA GCGGACGAAG AGCGTCGAGA CCGACGCGAG CCTCCGGCTC
GGCGAGGAGG TCACGGTGCG CGGGACAGAA CGAGACGGAA CGATCGACGC CGACGACGTG
TTCTAA
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| Protein sequence | MGVIEDVYED LDTDVEFEEF EAAVEDKVEQ MGGLADEETA AMLIAHELRD EEADTIADIE
PGMNDVKFLG KVTSIGDIRT FERDDEDAEE GRVCNVDVAD ASGSVRVALW DDMAAAAEEQ
LEVGQVLRVM GRPKEGYSGL EVSADKVEPD EDAEVDVQVL DTYRVEDLSL GASDVDLVGQ
VLDTDSIRTF DRDDGSEGRV ANLTVGDETG RVRVTLWDDK ADLVEEFEAG EVVEVGDGYV
RERDGDLELH VGDRGTVERV DEDVEYVPET TDIAELEIGE TVDIGGGVIE TDPKRTFDRD
DGSEGQVRNV RIKDDTGEIR VALWGDKADR EIELADRVVF TDVEVQDGWQ DDLEASANWR
STVTVLDEGS DAVGGASGSG SAGSSDDGDA HGTNNTGLGA FAGDEQKAAA EAVAGETGGD
GGNSGVGGGN GGSGGAATAT AEQSAEEIEF TGTVVQTGDP VVLDDGQRTK SVETDASLRL
GEEVTVRGTE RDGTIDADDV F
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