| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0109 |
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| Symbol | |
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| ID | 7401629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 114841 |
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| End bp | 115845 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643707172 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_002564785 |
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| Protein GI | 222478548 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.39401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCG GCTACAGCGA TCGGTGTCTC GAACACGACA CCGGCGAACG GCATCCGGAA
AACCCAGATC GACTGCGCGC GATCCGTCGC GGCCTGGCGA AGCGACACGG CGTCGAGTAC
GCAGAGGCGG ACCCCGCGAC GCGCGAGGAG GTTGTCGCGG TCCACGACGC GGAGTACGTC
GACGAACTGG AGGCGTTCGT CGCCGACGGC GGCGGGAGCT GGGACCCCGA CACCGTCGCG
AGCGAGGGGA CGTGGGACGC TGCCCTCGCC TCGGCCGGCC TCGCACAGTG GGCGGCTCGA
TCCGCGCTCA ACGGCGCCGA CGGTCGAGAC ACCCCGTTTG CGCTCGGACG GCCGCCGGGC
CACCACGCGG TGCCCGATGA CGCCATGGGT TTTTGCTTTT TCAACAACGC CGCCGTCGCG
GCCCAGACCG TTCTCGACGA CGGGGCCGCA GACCGGGTCG CAGTCTTCGA CTGGGACGTA
CATCACGGAA ACGGGACCCA AGACGTATTC TACGACCGCG GTGACGTGCT CTACGCATCG
ATTCACGAGG ACGGACTCTA TCCGGATACC GGAGCGCTCG ACGAGACCGG CCACGACGAA
GGGGCGGGAA CAACGGTGAA CCTCCCGCTT TCGGCCGGGG CGGGCGACGC CGACTACCTC
TACGCCATCG ACGAGGTGGT CGCCCCGGCG ATCAAACGGT TCGACCCCGA TCTCGTGATC
GTCTCGGCCG GGTTCGATGC TCACCGACAC GACCCCATCT CGCGGATGCG CGTCTCCTCG
GAGGGGTACG CGCTGATGAC CGACCGAATC CGGACGGTCA CCGACAACAT CGAAGCTGCG
AACTCCTACG TCCTTGAAGG AGGCTACGGT CTCGACACGC TGGCCGAAGG CGTCTCGATG
GTCCACGAGA CGTTCGACGG GCGCACGCCT GTCGGCGATG ACGACGACCC CGACGAGAAG
ACGGAGTCGT TGGTGACCGA GTTGCGGGAG CTGCTCGACT TATAA
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| Protein sequence | MRFGYSDRCL EHDTGERHPE NPDRLRAIRR GLAKRHGVEY AEADPATREE VVAVHDAEYV
DELEAFVADG GGSWDPDTVA SEGTWDAALA SAGLAQWAAR SALNGADGRD TPFALGRPPG
HHAVPDDAMG FCFFNNAAVA AQTVLDDGAA DRVAVFDWDV HHGNGTQDVF YDRGDVLYAS
IHEDGLYPDT GALDETGHDE GAGTTVNLPL SAGAGDADYL YAIDEVVAPA IKRFDPDLVI
VSAGFDAHRH DPISRMRVSS EGYALMTDRI RTVTDNIEAA NSYVLEGGYG LDTLAEGVSM
VHETFDGRTP VGDDDDPDEK TESLVTELRE LLDL
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