| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0104 |
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| Symbol | |
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| ID | 7401622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 106412 |
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| End bp | 107626 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643707165 |
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| Product | DNA-directed RNA polymerase subunit A'' |
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| Protein accession | YP_002564780 |
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| Protein GI | 222478543 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02389] DNA-directed RNA polymerase, subunit A'' |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.594351 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGT ACGACCACGT CACCGACGAC ATGGAGGCAG TCGTGGGGGC CACGGAGCTT
CCCGCCCGCC TCAAAGACGA GGTGTACGAG GCGATTAACC GAAAGGCGGA GGAGACCGGC
GAGGTCACCG TCGAGCAGGC CACCGACATC GCTACCGGCG TCGAGAATCG CTACATCGAG
ACGCGGGTCG ATCCGTTAGA CCCCGTCGGC ACTGTCTCCG CGCAGTCGAT CGGCGAGCCC
GGGACGCAGA TGACGATGAA TACGTTCCAC TACGCCGGCG TCGCGGAGAT CGACGTCACG
CAGGGGCTCC CCCGGCTCAT CGAGCTGGTG GACGCCCGGA AGACGCCGGA CACCCCGATG
ATGACCGTCC ACCTCGACGA CGAGTACGGG ACGGACCGCG AGAAGGCCCA CGAGGTCGTC
TGGTCCATTG AGGCGACGCG CATCCTCGCG CTCGGCGACG TGTCGACGAA CGTCGCAGAC
ATGCTGGTGC GGATCGACTT GAACGACGAC ACCCTCCTCG AACGGTGGCC GACCCACTCG
GACCCGTCCA AGGTCGCCGC GATCATCGCC GAAACGATCG AAGATTCGCT CGGCGTCAAC
ACTCGGCAGT CGGGGACCGT CGTTGAGTTC GGCCCGAACG AGCCGAGCTA TCGCGAGCTG
CTCCAGCTCG TCGAGCGGCT CCGGGAGATC GTGTTCAAAG GTATCGAAGA GATCGAGCGC
GTCGTCATCC GGAAAGAGGA GATCGACGGC GACGAGGAGT TCGTCCTCTA CACCGAAGGA
TCGGCGTTCG GCGACGCCCT CGACATCGAG GGTGTCGATG CCTCGCGCAC GACGTGTAAC
AACATTCACG AGATCTACCG CAACCTCGGG GTCGAGGCGG CCCGCGAGAC GATCATCGAC
GAGACGAAAA ATACGCTCGA AGAGCAGGGG CTCGACGACG TGAACGTTCG GCACCTCATG
CTCGTGGCGG ACATGATGAC GACCAACGGC GAGATCGATT CGATCGGTCG CCACGGCATT
TCCGGGTCGA AGGACTCCGT GCTCGCACGC GCGGCGTTCG AGGTGACGGT CAACCACCTG
CTCGACGCCG CGATCCACGG CGAGTACGAC GAGCTCGACG GCGTCATCGA GAACGTCATC
GCCGGTAAAC CGATCTCGCT CGGCACCGGC GACGTCGACC TCCGGATGGG GTCGCGCGTC
GTGGGCGACG ACTAA
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| Protein sequence | MTEYDHVTDD MEAVVGATEL PARLKDEVYE AINRKAEETG EVTVEQATDI ATGVENRYIE
TRVDPLDPVG TVSAQSIGEP GTQMTMNTFH YAGVAEIDVT QGLPRLIELV DARKTPDTPM
MTVHLDDEYG TDREKAHEVV WSIEATRILA LGDVSTNVAD MLVRIDLNDD TLLERWPTHS
DPSKVAAIIA ETIEDSLGVN TRQSGTVVEF GPNEPSYREL LQLVERLREI VFKGIEEIER
VVIRKEEIDG DEEFVLYTEG SAFGDALDIE GVDASRTTCN NIHEIYRNLG VEAARETIID
ETKNTLEEQG LDDVNVRHLM LVADMMTTNG EIDSIGRHGI SGSKDSVLAR AAFEVTVNHL
LDAAIHGEYD ELDGVIENVI AGKPISLGTG DVDLRMGSRV VGDD
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