Gene Hlac_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0092 
Symbol 
ID7401610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp95146 
End bp95736 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content68% 
IMG OID643707153 
ProductNUDIX hydrolase 
Protein accessionYP_002564768 
Protein GI222478531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.932953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG ACCTCCGCGA CCTGCCGGCC TTCGACGACG GGCGGACCCA CTCGCTACCG 
GGCGAGCCGG AGTGGCCGGT CCGGGAGGTC GTCGTCGAGT ACGACGAGGG GTGGTTCGTC
GGCGGGTACG ACCGCGTCGA GCAGCCCGAC GGGACGGAGA AGAAGTACTA CTGGGCGGAA
CTGTCGCCCG CGACGATCGT GGTCGCGGTC GCCGACGACC AGGTGTTGTT CGTCGAGCAG
TACCGACCGA CCGTGCGGAA CACCCAACTG GAGCTTCCCG CGGGGATCGT CGAGCCCGGC
GAGTCGTACA CCGCCGCCGG CGCCCGCGAA CTCGCCGAGG AGACCGGATT TGAACCGTCG
TCGACATCGC TGCTGCAGGA GGTGTGGTGT TCAACTGGGG TTCTCCGGCA CAAACGCGGC
TACGTGTTTG CCGAGGGGTT AGAGCCGGTC GACGTCGACC ACGACAGCAA CGAGTTCCTC
GTCCCGCGGA CGGTCCCGAT CGACGAGGCG CTGGCGGTCG CCCGAGAGCC GCCGACCAAC
GACGCGACGC TGGAGGGGTT GCTGTTGGCC AAAGCGGACG GCTGTTTATA A
 
Protein sequence
MSDDLRDLPA FDDGRTHSLP GEPEWPVREV VVEYDEGWFV GGYDRVEQPD GTEKKYYWAE 
LSPATIVVAV ADDQVLFVEQ YRPTVRNTQL ELPAGIVEPG ESYTAAGARE LAEETGFEPS
STSLLQEVWC STGVLRHKRG YVFAEGLEPV DVDHDSNEFL VPRTVPIDEA LAVAREPPTN
DATLEGLLLA KADGCL