Gene Hlac_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0088 
Symbol 
ID7401606 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp92216 
End bp93322 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content69% 
IMG OID643707149 
Productglycosyl transferase family 3 
Protein accessionYP_002564764 
Protein GI222478527 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0547] Anthranilate phosphoribosyltransferase 
TIGRFAM ID[TIGR01245] anthranilate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.826373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAGG CGACTCAGGA GTTCGGCGAC TGGCCCCTCA AACGGCTGAT GACCGATGTC 
TGCGGCTCCG GCCACAAGTC GGCCGACGAC CTGACGCGCG CGCAGGCGAC CGAGGCGTTC
GAGCGCATCC TCGCGGACGA GCCCGACCCG ACCACGCTCG GGGCGTTCTG GCTCGCGAAC
CGCTGGAAGC GGAACACGGC CGAGGAACTC GGCGCGTACG TCGACGTGAT GTGCGAGCGC
GTCGAATACG CCGAACCCGA CGCCGACCCC GTCGACTGCG GCGCCAACTA CGACGGCAAG
GGACGCTCCG CGATCCTCGG CGTCGCGGCC GGCGTCGTCG CGGCCGCCGC GGGCACCCCT
GTCGTCGTCC ATTCGGGCGA CCGGGTCCCC ACCCAGAAGC AGGACGCGTA CAAGCACGTC
CTCGACGAGC TGGGCGTCCA CACCGAGCTG ACGCCTTCGG ACTCCGCCGA CATGGTCGAC
GAGACCGGCT TCGGCTTCTA CTACCAGCCC GCGTTCAACC CCGCCATCGA CGACCTGTTC
GACCGCCGCG ACCAGATGGG GGTCCGGACG TTCGTCAACA CGATCGAGAC GCTGGCGAAC
CCCGCCGGGG CGTCGGTCCA CCTCGGCTCC TTCTACCACC TCGCGTTCGC GAAGAAGGTG
GTCGACACGT TCGTAGAAAG CGAGTTCCAC GACCTCGACC GCGTCCTGAT GTTCCAGGGG
ATGGAGGGGT ACGACGACGT GCGCCCCGGC TACACCAAGG TCGCCGAGTG GGACGCGGCG
GGCGGCGACG GGGACGAAGC GGGAGACGCC GGCAGCGAGG GCGCGTCCTT CGACGACTTC
GAGATCGAGA CCGCCAAGTA CGGGATGGAC CTCGAAGAGG AGGACCTCGC GGTCGACGAC
GTCGCGGTCG AGTCGGCAGA AATCACCGAG GCGGTGCTGA CCGGCGAGCG CGACGGGCCC
TTCGCCGACG CGGTCGCGGT CAACGCTGCG CTCCGTATCT ACGCCCGCGA AGACGCCGAC
TCGATCGAGG ACGGCCTCGA CGCGGCCCGA GCAGTTATCG ACGACGGCTC CGCACACGAC
GTTCTCGAAG CGCTTCGCGA CTTCTGA
 
Protein sequence
MAQATQEFGD WPLKRLMTDV CGSGHKSADD LTRAQATEAF ERILADEPDP TTLGAFWLAN 
RWKRNTAEEL GAYVDVMCER VEYAEPDADP VDCGANYDGK GRSAILGVAA GVVAAAAGTP
VVVHSGDRVP TQKQDAYKHV LDELGVHTEL TPSDSADMVD ETGFGFYYQP AFNPAIDDLF
DRRDQMGVRT FVNTIETLAN PAGASVHLGS FYHLAFAKKV VDTFVESEFH DLDRVLMFQG
MEGYDDVRPG YTKVAEWDAA GGDGDEAGDA GSEGASFDDF EIETAKYGMD LEEEDLAVDD
VAVESAEITE AVLTGERDGP FADAVAVNAA LRIYAREDAD SIEDGLDAAR AVIDDGSAHD
VLEALRDF