Gene Hlac_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0075 
Symbol 
ID7401430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp80264 
End bp80695 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content69% 
IMG OID643707136 
Producthistidine triad (HIT) protein 
Protein accessionYP_002564751 
Protein GI222478514 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCAG ACTGCATCTT CTGTTCGATC GTCGACGGCG ACATTCCGGC CCGAACTGTC 
CACGAGACCG ACGACGTGCT GGCGTTCCTC GACGCCAACC CGCTCGCACC GGGGCACACG
CTCGTGATAC CCAAAGCGCA CGCACAACAC GTCGGGGACC TCGACGACGA CCTCGCGAGC
GACCTCTTCG CGGCCGTGAC GGAGCTCACG CCGCGAGTGC AGGCCGCCGT CGACGCCGAG
GGCGCCAACG TCGGAATTAA CGACGGTGAG GCGGCGGGAC AGGAGGTTCC GCACGTCCAC
GTTCACGTCA TTCCGCGGTT CGAGGGCGAC GGCGGCGCGC CGCTCCACGC GGTCGGCGGC
AAGCGCCCCG ACCTGTCCGA GGAGGAGTTG GACGCGATCG CCGACGACGT GGCGGCAGCG
ATCGACGAGT GA
 
Protein sequence
MSADCIFCSI VDGDIPARTV HETDDVLAFL DANPLAPGHT LVIPKAHAQH VGDLDDDLAS 
DLFAAVTELT PRVQAAVDAE GANVGINDGE AAGQEVPHVH VHVIPRFEGD GGAPLHAVGG
KRPDLSEEEL DAIADDVAAA IDE