Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0066 |
Symbol | |
ID | 7401421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 68569 |
End bp | 69657 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643707127 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_002564742 |
Protein GI | 222478505 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.869927 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.262294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAC CACAGAACAC AACCGCGGAA GCGACGGAGG GCCGTGAAGA TCCGATCCTC TCCGTGAGAG ACCTCCAGAC GGTTTTCTAC ACCGATAACG AGACGATCCG AGCGGTCGAC TCGATCAGTT TCGACGTCGG TCGCGGCGAA ACGGTGGGAA TTGTCGGCGA GTCTGGATCG GGCAAAAGCG TTACCGCTCG CTCGATCATG GGGTTGATCG AGTCGCCCGG CAAGGTACTA CCGGGGTCGT CGATCTCCTT CGACGGACAG GAACTCACAG ACCTCTCGGA GAAACAGTAC CAGTCGATCC GTGGAAGCGG GATCGGGATG GTCTTTCAGG ACCCCCAACA GTCGCTTAAC CCCGTCTACA CTGTCGGCAA CCAGATCCGT GAATCGCTTG CAATCAACCG CGATATCACG GGTGAAAAGG CGACCACGGA GGCGACGAGA CTGCTCCGGG CCGTCGGTAT TCCGGATGCC AAACGCCGGT TGGACGAGTA TCCACACGAG TTCTCCGGCG GGATGCGTCA GCGTGCCGTC ATCGCGATGA TGCTCGCGTG TGACCCGGAC TTTCTGATCT GTGACGAACC GACGACTGCA CTCGACGTGA CGATCCAGGC ACAGATCCTG GAACTCTTAA AAGAGCTCCA AGAGGAACGC GGCCTGTCGA TACTGTTCAT CACGCACGAC ATGGGTGTCG TCGCGGACAT CGCAAACCGT GTGAACGTGA TGTACGCGGG ACAGATTGTC GAGAAGGCGA CCGTCGAAGA TCTGTTCGCG AACCCACAAC ACCCGTACAC GAGAGCGCTG CTCAGGTCCA TTCCCGGTGA ACACTCCCGT GCGGACGGGC TCGAAACAAT CGAGGGGCAG GTGCCGACAC CGAACGAACC GGCCGATCAC TGTCGGTTCG CGCCTCGGTG TTCGAAGGCG TTCGACGCCT GCGAGAACGT GCCACCACAG CACGTTCCTG TCGGGGACAG CGAGGATCAC ACGGCGTCGT GTCTGTTGTA CCCCGACGAC CTGAGTGAGA CGGCGCGCGT TGAGAGACAC GTCGAGAGAG CGACCGAACG AACGGAGGAA CACTCATGA
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Protein sequence | MSQPQNTTAE ATEGREDPIL SVRDLQTVFY TDNETIRAVD SISFDVGRGE TVGIVGESGS GKSVTARSIM GLIESPGKVL PGSSISFDGQ ELTDLSEKQY QSIRGSGIGM VFQDPQQSLN PVYTVGNQIR ESLAINRDIT GEKATTEATR LLRAVGIPDA KRRLDEYPHE FSGGMRQRAV IAMMLACDPD FLICDEPTTA LDVTIQAQIL ELLKELQEER GLSILFITHD MGVVADIANR VNVMYAGQIV EKATVEDLFA NPQHPYTRAL LRSIPGEHSR ADGLETIEGQ VPTPNEPADH CRFAPRCSKA FDACENVPPQ HVPVGDSEDH TASCLLYPDD LSETARVERH VERATERTEE HS
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