Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0046 |
Symbol | |
ID | 7401399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 47675 |
End bp | 48769 |
Gene Length | 1095 bp |
Protein Length | 364 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643707105 |
Product | hypothetical protein |
Protein accession | YP_002564722 |
Protein GI | 222478485 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.56451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0146014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACTCA GGTGTCTGCT CGGGCACGAC TTCGGCGAGC CCGAACTACG GCGCGAGCGC GAGGAGGACG GGAACGAGGT TGTCACCACC GTCACCGAGG TAAAGACCTG CGCTCGCTGC GGCGAGACGC AGGTGGTCAG CGAGAACACT GAGGTCACGA CGATGAAACA GCTGACCGAT GAGGCCACCG TCGTGGGCGA CGAGCCGACG GGGCCCGACG CCGATTCGGA CCGCGAGACT CCGGTAACCG GCGTCGAGGG GACCGGTCCC GACGGCGATA TCGACGGCGA CGACGCCGTG ATCATCGGCA ACAGCCCCGA GGACGGCGAC GACACGGCCG ACATCCCCGC AGAGCCGGGA GCGGCCGACG CCAGGACACC GGAGACGAAA CCGGGCGATA CGACCGCGTC GGAGTCGGAA ACAGAAGCGG ACGTGGAGGC GGGAGCGGCC GGCGATGACG GCGGGGCAGA GCTGATCGAC GAAGGGCCGT CGGGCGCGGG CGACGACGAC AGCAACGGCA GCCTCGAACG CGACGATGGT GAGTACGCGG CGTACCCGGA GGCCGAGACG ACGGAGCCGA CCGCCGACGA GGAGCGCGCC GAGACCGACG ACGGCGTGAT TCTCGACGAG GAGGGCGAAG ACGCTGACGA CCGCGAGCGC GGCGCGTGGC CCGACGTGGA CGAGTCGGAC GAGGGTGGTG AGGAGCCGAC CCCGTGGCCC GAACACGGCG GCGAAGACGA GGGGTTCAGC GCCGAGCTAG ACGACGGCAA CACGGGCGAC GTGGAGTTCG GCGGGGGGCT CACGCCCGAG GCCGCCGACC AGCCGACCGA CGGTGAGGAC GCGGACTACG TCGAGGCACC GGCGCAGACA GCGGTCGAAG CGAACGGTGC GGCCGAGACC GGCAGCGCAG TCGACGACGG CGTCGGGATC ACCCGCGGCG ACAGCCCGGA CCTCGAAACG TCGACCTCAG AGGTGACGAC AGAGTACTAC TGTCCCGAGT GCGAGATGAC TCGCGCCGCC GACGGCAACT CCATGCGCGC GGGCGATATC TGTCCGGAGT GCAAGCGCGG GTACGTCGAC GAGCGACCAA TCTAA
|
Protein sequence | MGLRCLLGHD FGEPELRRER EEDGNEVVTT VTEVKTCARC GETQVVSENT EVTTMKQLTD EATVVGDEPT GPDADSDRET PVTGVEGTGP DGDIDGDDAV IIGNSPEDGD DTADIPAEPG AADARTPETK PGDTTASESE TEADVEAGAA GDDGGAELID EGPSGAGDDD SNGSLERDDG EYAAYPEAET TEPTADEERA ETDDGVILDE EGEDADDRER GAWPDVDESD EGGEEPTPWP EHGGEDEGFS AELDDGNTGD VEFGGGLTPE AADQPTDGED ADYVEAPAQT AVEANGAAET GSAVDDGVGI TRGDSPDLET STSEVTTEYY CPECEMTRAA DGNSMRAGDI CPECKRGYVD ERPI
|
| |