| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0039 |
|---|
| Symbol | |
|---|
| ID | 7401392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 42002 |
|---|
| End bp | 42328 |
|---|
| Gene Length | 327 bp |
|---|
| Protein Length | 108 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643707098 |
|---|
| Product | NifU domain-containing protein |
|---|
| Protein accession | YP_002564715 |
|---|
| Protein GI | 222478478 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0694] Thioredoxin-like proteins and domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.781326 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.020346 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG AAAGCCTCGC GGACCGGGTC GAGAAGTGGA TGGTCGGACA GATGCCGATC
ATCCAGATGC ACGGCGGCAC GAGCGTCGTG CGCGAGGCGG ACGCCGAGAC CGGCGAGGTC
GTCGTCGAAC TCGGCGGCAC CTGCTCCGGG TGCGGTATCT CGAACATCAC CGCCGACAAC
ATCCGCCGCG ACCTGATCAT GGACTTCGAC GAGGTGGAGA ACGTGACGGT GCGGTCCGCC
TCCTCCGGCG ATCAGGGCGC CTCCACGGTG GAGGGCGGTC GCGGCGGCGA GCTGAAACAC
GAGACCGAAT CCGCGAACCA CTTTTAA
|
|---|
| Protein sequence | MSDESLADRV EKWMVGQMPI IQMHGGTSVV READAETGEV VVELGGTCSG CGISNITADN
IRRDLIMDFD EVENVTVRSA SSGDQGASTV EGGRGGELKH ETESANHF
|
|---|
| |