Gene Hlac_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0037 
Symbol 
ID7401390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand+ 
Start bp40843 
End bp41445 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content68% 
IMG OID643707096 
Productferredoxin 
Protein accessionYP_002564713 
Protein GI222478476 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID[TIGR02008] ferredoxin [2Fe-2S] 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.92312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0229363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATC CGCTCATCAC GACGATCGTG AACCCGACGG CGATCGTCGT CGCGGTGATC 
GCGACGCTGC TCGTCGTCCT CGTCAGTTCG CTGAAGGGGA GGGGTTGGGA GCCCGCGACG 
GACATCTCGG ACGAGGTACT CCAACGACGC GCCGCCGCCG TGCCCGAGAC CGAGTTCCCC 
GAGCCCGGGA ACCGCTCGAT CGGCGGCGGT GGCGGCGGCG GGGCGATCCC CGCCGGCGGC 
GAAGGCGAGG AAGGTGAACT GGAGGATGGT GCGGCGGGCG GCTCCGGGCC CGGCGACATC 
CCCGAAGACG AGGTCGAGTA CTTCGAGGTC GAGTTCGTCA AGCAGGGCGA GACCGTCGAA 
CTCTCCAACA ACGAGCCGAT CTTGGACCAG GGCGAAGATC AGGGCTGGGA CCTCCCGTAC 
GCCTGCCGGC AGGGCCAGTG TGTCTCCTGT GCCGGTCGGA TCGCCGACGG TCCCTCCGAG 
GACTTCGTCG AGCACGACAA CCAGCAGATG CTCGAAGACG CCGAGATCGA GGATGGCTAC 
ACCCTGACCT GCGTCGCGTA CCCCCGCGGC TCCTTCAGCA TCGAGACTGG CGAGGCGCCG 
TAG
 
Protein sequence
MLNPLITTIV NPTAIVVAVI ATLLVVLVSS LKGRGWEPAT DISDEVLQRR AAAVPETEFP 
EPGNRSIGGG GGGGAIPAGG EGEEGELEDG AAGGSGPGDI PEDEVEYFEV EFVKQGETVE 
LSNNEPILDQ GEDQGWDLPY ACRQGQCVSC AGRIADGPSE DFVEHDNQQM LEDAEIEDGY 
TLTCVAYPRG SFSIETGEAP