Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0035 |
Symbol | |
ID | 7401388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 40168 |
End bp | 40650 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643707094 |
Product | putative RNA-binding protein |
Protein accession | YP_002564711 |
Protein GI | 222478474 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2016] Predicted RNA-binding protein (contains PUA domain) |
TIGRFAM ID | [TIGR00451] uncharacterized domain 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0118889 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTGA AATCGCGGCA TCACCTCCGG AGCGACGATA TCACGGCGAT CCGCGAGGCG GTCGCCGACC ACCTCGGCGT CGACATCGAC GGGGACACCT TCGAATTCGT CGAGTTCGTG GACGCGAACT ACGAGCTCGT GTTGGTCGAC GGAGAGCCGG CGGTCTTCTA CGTCGACGAC GACGAGCCGT TCCTCACCGT GCGAGGTGCG AACGATTACG AGCCGGAGAC GGGAATCGTC ACGGTCGACG CGGGGGCCAT CTCGTTCGTC TCCGGCGGCG CCGACGTGAT GCGCCCCGGC ATCGTCGAGG CCGACTCGGC GATCCGCGAG GGCGACCTGG TCGTGATCGC CGAGGAGACC CACGAGAAGG TGCTCGCGGT CGGCCGCGCG CTGGTCGACG GCGATAATAT GGTCGGCGAC AGCGGGAAGG TCGTCGAGTC GATCCACCAC GTCGGCGACG AGCTGTACGA ATTCTCGGGG TAA
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Protein sequence | MEVKSRHHLR SDDITAIREA VADHLGVDID GDTFEFVEFV DANYELVLVD GEPAVFYVDD DEPFLTVRGA NDYEPETGIV TVDAGAISFV SGGADVMRPG IVEADSAIRE GDLVVIAEET HEKVLAVGRA LVDGDNMVGD SGKVVESIHH VGDELYEFSG
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