Gene Hlac_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0009 
Symbol 
ID7399452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp9368 
End bp10036 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID643707063 
Producthypothetical protein 
Protein accessionYP_002564685 
Protein GI222478448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.91294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGTA ACTACGGCGA GATGTGGGTG TACGAGAGCC TCGTCGGCGG TATTCCCGGA 
CTTGACATCT CTCGAAGGCT CGCAGTCGCG ATCCAGTTCG TCCTCTTCGA GGTCGGCGTG
GTGGCTCTCG GCTGGTACTA CGGGCTGTGG GATGCGGTCG TCGCCGGGAC CGTTGCCGTC
GCGGTGGCGG CCGTCGGTAG CGTCGAGATG CACCGGCTCG GTGCGATCAA CCGCCGGCTT
CCGACGCCGC CGGCGCACAA GCGGCTACTG TTCGGGTCGA GCATCGAGAT CGTCCTCGGC
GTGCTCGCGT TCATCGCTCT CGTCACGTAC CTGATCGCGT GGGACGGTGC CCTGCTTGAT
CGACTATTCG GTCCCGACCC GCCGATTCCG GTCGTTTACC TCTCGCTGTT GATACTCTGG
GATCTCACCT ACCGGATCGG TACCTCGTGG TGGAGTGCGG TCGTCGCGCT GTGGCGCGCG
GTCCACGTTG ACCTCTCTCC AGCGGCGACC TCGCGAGCCA GACGGCTCGA CGCGGAGAAC
ATTGCGTTCT CGGCGCTCCA ACTGGTGCTC GTCCCCTTCC TGCTCTCAGA ACCCGTCCTG
CTCGGGGCGG TCGTCGGACA CGTTCTCGCT GTCGCGATCG TCTGTTCCGC GGCGATCGTG
CTCTCGTGA
 
Protein sequence
MSRNYGEMWV YESLVGGIPG LDISRRLAVA IQFVLFEVGV VALGWYYGLW DAVVAGTVAV 
AVAAVGSVEM HRLGAINRRL PTPPAHKRLL FGSSIEIVLG VLAFIALVTY LIAWDGALLD
RLFGPDPPIP VVYLSLLILW DLTYRIGTSW WSAVVALWRA VHVDLSPAAT SRARRLDAEN
IAFSALQLVL VPFLLSEPVL LGAVVGHVLA VAIVCSAAIV LS