Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_3248 |
Symbol | |
ID | 7398847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012028 |
Strand | - |
Start bp | 511974 |
End bp | 513278 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643707040 |
Product | transposase, IS605 OrfB family |
Protein accession | YP_002564662 |
Protein GI | 222476141 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGATTC AGGTCACTCG AACCTACGTT GCTACCATAC GGAATCAGCA ACAGGTCAAG GGTGATCTGG ACTCGCTTGG GTTTGCCGCC TCGAAACTCT GGAACATCGC ACGCTGGACG TGCAACCGTA TCTGGAGCGA GACAGGGACA ATCCCCGAGG ATGGCCCACT CAAGGCATAT CTAAAGAACC ACGAACGCTA CGCCGACCTC AATTCACAGT CGAGTCAGCG AGTCATTGAA GAACTCGCTG AAGCGTTCCA CGGGTGGTAT GCCAAACGCC GAAACGGGGA CGACCGCGCA AACCCACCGA AGTATCGCAA GAACGGCGAC AATCATCCAC GGTCGACGGT TACGTTCAAA GAAGACGGCT TCAAACACGA CAGCAAGAAC AACCGGATAC GCCTCTCGAA AGGCCGCAAC CTCAAAGAAC ACTGGTCAGA TTTCATTCTC TGCGAGATCG AAACCCGGCC AGATGTTGCT GTCGAGAATG TTCGTCAGAT AAAAGCAGTC TGGAATGGAG ACGAATGGGA ACTTCATATC GTCTGTAAAC ATGAGATCGA GGCTGAGTCT CCCGGCGACG AAACTGCCGG GATCGACCTC GGTATCTCGA ACTTCGCCGC CGTCTCGTAT TCCACAGGCG ACCATGAGTT GTATCCGGGG AACGTTCTCA AGACTGACGA ACGGTACTTC GCCAAGGAGA TAGCGAAGTG CAACTCCTCC CGGTCAAACA AGGCACTCCG ACTCCGGCAG AAGCGTTCCG AGCGTCGGTC GCACTACTTA CACGCTGTCA CGAAACACAT CGTTACAGAG TGTGTTGAAC GAGGTATCGG AACAATTGCT GTCGGCAACC TCGGAGGCAT ACGTAAAGAC GACGAGACTG GTGAGCCTCG GAACTGGGGC GACCGTGGAA ACAAAGGCTT GCACGGATGG GCGTTCGACC GCTTCACGAC TTTACTCACC TACAAGGCGA AAGCCGAAGG GATCGCAGTG GTCGTAGTGA GCGAACGAGA CACGTCGAAG ACGTGTTCGT GTTGTGGACA GAAACGAGAC GCAAACCGTG TAGAGCGCGG CTTGTACGTC TGTCGTGGGT GTGAAGCCGT GATGAACGCC GACTCGAATG GTGCAGAGAA CATTCGGCGT CGGTTAGACC AAGCACAAAA GGTAACTCCG AGTCCCCGAT CATCCGGGGA TAGGTGTAGC GGGCGTGTGG CACGTCCAGT AGTCAACCTG TTCCGTCGTG GAGAACACGA CCCCAGCTGT GGACAGGGGA CGTTCGCTCA ACAGGCGAGC ATCTGCAAAC GATAA
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Protein sequence | MAIQVTRTYV ATIRNQQQVK GDLDSLGFAA SKLWNIARWT CNRIWSETGT IPEDGPLKAY LKNHERYADL NSQSSQRVIE ELAEAFHGWY AKRRNGDDRA NPPKYRKNGD NHPRSTVTFK EDGFKHDSKN NRIRLSKGRN LKEHWSDFIL CEIETRPDVA VENVRQIKAV WNGDEWELHI VCKHEIEAES PGDETAGIDL GISNFAAVSY STGDHELYPG NVLKTDERYF AKEIAKCNSS RSNKALRLRQ KRSERRSHYL HAVTKHIVTE CVERGIGTIA VGNLGGIRKD DETGEPRNWG DRGNKGLHGW AFDRFTTLLT YKAKAEGIAV VVVSERDTSK TCSCCGQKRD ANRVERGLYV CRGCEAVMNA DSNGAENIRR RLDQAQKVTP SPRSSGDRCS GRVARPVVNL FRRGEHDPSC GQGTFAQQAS ICKR
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