Gene Hlac_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3240 
Symbol 
ID7398841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand+ 
Start bp505013 
End bp506155 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content60% 
IMG OID643707034 
Productintegrase family protein 
Protein accessionYP_002564656 
Protein GI222476135 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCG ATCAACAGGA CGCTTCTCCG GGGGTTCAGC CCATCGAAGA CGCCGTCGAC 
GAGTTCCTCC AGCGTGGCTC CAAGTCTGGC AACTACAAAT CGAACTTAGA ACACGTGTTG 
ACACAGTGGC GAACCAACTG GCCCGGAGCC AGCGGCATCG AGACACTCGA CGACGTCGAC 
AAGAAGGTCA TGGCCGACTA CGCCACTCAC CTCAAACGAC GGATCGATGC TCGCCAGTCG 
ACCACCACTG ACAGCGACTC TGGCATCACG ATCTCGACGG CATGGGCGTA CTATGATAAT 
GTCTCGGCGT TCCTTGACTA CTGCTTAGAG TGGGACAAGA TCAGCGAGAA CCCGGCACAG 
AAAGCGATAG CCAAAGACCA GCTCCCCGAA CGGCCGTCGA CGGTCAGTGG CTCCCAACAG 
TTCTGGTCGA CTGAGGAACG CCGACAGCTC CTCGATCACG TCGACCGGCG AGCCTCCAAG 
GCTATCGACG AACGCGGAAC TGGCGCGGTC GTCGAGCTTC GAGACAAAGC ACTGGCATAC 
GTCCTAGCCT TTACGGGCGT GCGTGGTGGC GAGATCCTGA AAGACTCTCG CGACGACCGC 
CGAGTGGGGC TTCGGTGGGC CGACGTTAAC ATCGAAGACA ACCAAATCAC AATCCTCGGC 
AAGAACCAAC AGCGCGAGCC CGCACCACTG CCCGAACAGA CCCATCGGCC ACTCCAACAA 
CTCAAACGCG CCGTCGACCC AGCTTCGGAC GACTGGCCGG TGTTTGTCTC GCTACACGCG 
CCCTCAATGT ACGGTGTGTT GCCCGACGGG TTCGAACGGC CTGATAACGA CGAGCAGAGC 
CTACTAGACC ACTGTCGGAC TCTTGGGGTT GTGCCGCCAG CACTCTCGAC AAACGGCGCT 
CGATCAGTGT TGAAGCGACT CTGCGAGGAT GGGGATATCG ACGTCGACGG CGACGACAAG 
TATCTCACAC TACACGGTGC ACGGCGTGGA GTGGGCGAGA AACTGTATCG GGAACGTGGG 
GCCGCAGCCG CTCAACGGAC GCTCCGACAC GCCGATCCGA AGACGACCTC CGAGATGTAC 
TCACACATCG AGACCAGCGA GAACGCCGAG AACGTGAGTG AGGTCTTCAG GGACGAGCGG 
TGA
 
Protein sequence
MDTDQQDASP GVQPIEDAVD EFLQRGSKSG NYKSNLEHVL TQWRTNWPGA SGIETLDDVD 
KKVMADYATH LKRRIDARQS TTTDSDSGIT ISTAWAYYDN VSAFLDYCLE WDKISENPAQ 
KAIAKDQLPE RPSTVSGSQQ FWSTEERRQL LDHVDRRASK AIDERGTGAV VELRDKALAY 
VLAFTGVRGG EILKDSRDDR RVGLRWADVN IEDNQITILG KNQQREPAPL PEQTHRPLQQ 
LKRAVDPASD DWPVFVSLHA PSMYGVLPDG FERPDNDEQS LLDHCRTLGV VPPALSTNGA 
RSVLKRLCED GDIDVDGDDK YLTLHGARRG VGEKLYRERG AAAAQRTLRH ADPKTTSEMY 
SHIETSENAE NVSEVFRDER