| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_3187 |
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| Symbol | |
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| ID | 7399316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012028 |
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| Strand | - |
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| Start bp | 421881 |
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| End bp | 424790 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643706987 |
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| Product | helicase domain protein |
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| Protein accession | YP_002564609 |
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| Protein GI | 222476088 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGACC TCGCACCCGG AGACACGATT CTTCTCAACG ACAACCCTGC AGAGGTCATC
AAGACGTACT CCGTCGGCAA CCTCGACTAC CTCAGGGCCT ACGTCGAGGA CGTCGGCGTC
AAGACCGTCT GTATCGCCGA CGTCGACATC GAGCCCCAAC GCGAGCAACT CGGTGCCCTC
GAACCCATGA CGGCCGACCA GCTCCATCCC GACCACGACG CAGTGTCCGC CGAATGGTTC
GACCTCCGCT CACAGGCGCT CCAGCTCCAG ATCGCCCACG AACAGGGGCA ACTCCTGAGT
ATCTCGAACT CGCTCGTCCG CCTCGAACCG TACCAACTCG CCTGCGTGAA CTGGGTGATG
CAGAAACTCC GCCAGCGAGC GCTCATTGCG GACGACGTCG GGCTGGGGAA AACCATCGAG
GCGGGACTCA TCCTCAAAGA GCTCACCGCA CGCAACCGCG CCGACCGCGT CCTGTTCGTC
GTCCCAGCCC ACCTCCAGAA GAAGTGGATT CGCGATATGG ACCGCTTCTT CGACATCAGC
CCTACACCAG CTGATCGGCA GTGGGTCGAG GGCGAACGCC GCCGCCTCGG CGAGGAGACG
AACATCTGGG ACCAGGACCA CCAACAGATG GTCACGAGCA TGGCGTTCCT CCGCCAGGAA
GAATTCCGCG AGGAACTCGA CGACGCGTTC TGGGACGTCG TGGTCGTCGA CGAGGCACAC
AAGGCAGCCA AGCGCGGCGA GTCCCCGAGC AAAACGTCGA AGATGGTCGA ACGAGTGGCT
GACAACTCCG ATTCGTTGCT CCTGCTCAGC GCGACGCCAC ACGACGGCAA GGGCGAAGCG
TTCCGGTCGC TCATCGAGTA CATCGACCCG TTCCTCGTCG CCGAAGACCA GGACCTCTCG
AAGGAAGCAG TCGACCGCGT GATGATGCGC CGCGGCAAGC AGACTATCTA TGACGACGAC
GGCGAGCGCA TCTTCCCGAA CCGTGATGTC GGAACCATCC CGGTCGAGAT GACCCACGAG
GAGCGCCAGT TCTACCGAGC GGTCACCGAC TACGTCAAGA ATGTTTACAA CCGCTCTGAA
CAGCTCAACG AGCCCGCTGT CGGCTTCGCG ATGGCGCTGA TGCAGAAACG CCTCGTCAGC
AGTATCGGGG CGATCAAGGC GACGCTCAGT CGTCGGCTCG CGAACCTCGT CGACCAGCAA
TCCACCACAA CCAATCTGTC CGAAGAAGCG TCGGCCTATC TCGAAGGTGA AGACCTCGAC
GAACAGGATC AGCAGAAGGC CGAAGAAGAG CTCTCCGGGC TCACTATCAC AGAGAGTGAC
GCACAACTTG AAGAGGAAAT CGAGACGCTC AGGGACCTCG TCTCACTCGC TGAGGGAATC
CCGGTCGACT CGAAGGCCCA GAAAGTACGT CGATACATCC AGCAACTGCT CGAAGAACAG
CCCAACGAGA AGATACTGCT GTTCACGGAA TACCGGGATA CGCTCGACTA TATCCTCGAT
CTCGTGAAGG ACGAGCCGTG GGCCGACGAG ATCCTCGTCA TCCACGGTGG TGTCGACAAG
GAAGACCGCA CTCGCATCGA GGACGAGTTC AATCACGGCC AGTCCCGATT GCTCTTCGCG
ACCGACGCAG CCAGCGAGGG GATCGACCTC CAGCACAGCT GCCACATCAT GGTCAACTAC
GAATTGCCGT GGAACCCGAA CCGTCTCGAA CAGCGCATCG GTCGCCTCCA CCGCTACGGC
CAGGAGAAAG AGGTCACGGT GTGGAACTTC TCGTTCGAGG ATACTCGTGA GAGTAAGGTC
TTCGAGATGC TCCAAGACAA GGTCGAGAGC ATCCGTGGGC AGCTGGGGAA CACAGCCGAC
GTCTTGGGGA TGCTCGACGA CATCAACGTC GACTCGCTCA TCATGGAATC CATCCGGAAC
GACGAACCGG CGAGTGCGAC GAAAGAAGAG CTGGAAGAAC TCATCGACGA ACGCCAGCGG
ACGCTCGCGG AGTGGTACGA GCGGAGTCTG ATCGATACAA CGACGTTCGA TGAGGAGAGC
CGGCGCAAGA TTCAGGACGT GATGGACCAG TCCGAGGATG TCTACGGCAG CGAAGCAGAT
CTCCGGGAGT TCTTTGAGCG GGGTATCTCG GCACTCGGTG GCGACGTCGA GAAGGCAGGG
AACAACCTCT TCCGAGCTGA GTTGCCCGAG TCGCTCCGCC GCTCGCGGGA CGGTGACCCC
TACGGCCCCT TCACCTTCAA TCGGGAGTTC GCGATGGACC ACGAGGGAAT CGAGTACATC
TCCCCAGATG CGGAACTGGT CCAAGAGCTT ATGCAGCAAG TGCTGGACAG CGAGCAGGGT
ACTGTTGGGA TCAAACTGCT CCCGTTCGTT GATGACCCCG GTATCACCTA CAACTATCGA
GTCAGGTTCG AGGACGGGAC GGGCGAGGTG ATTCGCGAGG AGATCCTTCC GGTGTTCGTC
GACGCGGCAC ACCGAGACCC CCAACAACGA CTCGGCCAGC GAGTCATCGG GGGAGACAGC
ATCATAGGCT CGCCCGAGGA GGGTCGCGTC CGGCCGCTCC TCGAGCACGA GCGAGAGATA
CGAACCTCCG CTGATCGATA TATTAGCCAG CGCGTTGAGT CACTCAGAGA CGAACTCCAG
CAGCGACGGC GCGAGGAGAC GCAGCAGGAA CTGGATGACC TCGAAGCCTA CGCGGAAGCC
GAACGCGAGC GTATCGAGAC GTTCATTGCC GACTACGAAC GCAAGGCTGA GGCCGGTACT
GACATGGACA TCGCCATTCG AAGACAGCGG GATCGGCTCT CGAAGCTGGA AGAGCGAATC
GAGAAACGCC GTCGTGAACT ACGACGGAAG GCGCAGGTCA TCTCCTTGGC ACCAGAAGTC
GAGAATGTTT GTCTCACGCT CCCGATATAG
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| Protein sequence | MQDLAPGDTI LLNDNPAEVI KTYSVGNLDY LRAYVEDVGV KTVCIADVDI EPQREQLGAL
EPMTADQLHP DHDAVSAEWF DLRSQALQLQ IAHEQGQLLS ISNSLVRLEP YQLACVNWVM
QKLRQRALIA DDVGLGKTIE AGLILKELTA RNRADRVLFV VPAHLQKKWI RDMDRFFDIS
PTPADRQWVE GERRRLGEET NIWDQDHQQM VTSMAFLRQE EFREELDDAF WDVVVVDEAH
KAAKRGESPS KTSKMVERVA DNSDSLLLLS ATPHDGKGEA FRSLIEYIDP FLVAEDQDLS
KEAVDRVMMR RGKQTIYDDD GERIFPNRDV GTIPVEMTHE ERQFYRAVTD YVKNVYNRSE
QLNEPAVGFA MALMQKRLVS SIGAIKATLS RRLANLVDQQ STTTNLSEEA SAYLEGEDLD
EQDQQKAEEE LSGLTITESD AQLEEEIETL RDLVSLAEGI PVDSKAQKVR RYIQQLLEEQ
PNEKILLFTE YRDTLDYILD LVKDEPWADE ILVIHGGVDK EDRTRIEDEF NHGQSRLLFA
TDAASEGIDL QHSCHIMVNY ELPWNPNRLE QRIGRLHRYG QEKEVTVWNF SFEDTRESKV
FEMLQDKVES IRGQLGNTAD VLGMLDDINV DSLIMESIRN DEPASATKEE LEELIDERQR
TLAEWYERSL IDTTTFDEES RRKIQDVMDQ SEDVYGSEAD LREFFERGIS ALGGDVEKAG
NNLFRAELPE SLRRSRDGDP YGPFTFNREF AMDHEGIEYI SPDAELVQEL MQQVLDSEQG
TVGIKLLPFV DDPGITYNYR VRFEDGTGEV IREEILPVFV DAAHRDPQQR LGQRVIGGDS
IIGSPEEGRV RPLLEHEREI RTSADRYISQ RVESLRDELQ QRRREETQQE LDDLEAYAEA
ERERIETFIA DYERKAEAGT DMDIAIRRQR DRLSKLEERI EKRRRELRRK AQVISLAPEV
ENVCLTLPI
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