Gene Hlac_3149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3149 
Symbol 
ID7399280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand- 
Start bp387887 
End bp388786 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content63% 
IMG OID643706951 
Productnucleic acid binding OB-fold tRNA/helicase-type 
Protein accessionYP_002564573 
Protein GI222476052 
COG category[L] Replication, recombination and repair 
COG ID[COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAGTA ACAGCTCTAG TAGCAAGGTC GTTACGGTGG ATGAACAGGC ATTCGAGAAA 
GCGGGCGGTC AGACGGTCGA TGAAGACGGG TTCCCGGTCG TCGACGAGAC GCCGGAGTTC 
CGGGCAACGG TCGACATGGA AGTGCAGGCG AAAGTCGATT CCAACCATCC TGACGCGCGG 
GTCGAGGAAG GCCCGGATCA CATGTTCGGG AAGACCCTCG AACAGGAGGA ACGCATCGAG 
GCGCGGGAGG CCGAGTTGGA GCACATCAGT GCCCAGGCTG AACTCAGTCA GCAGGAGGGA 
CGCGCGAAGC GGACGCGAGA TATCGCAGCG AAGCGGAGCG CTGAGCGGCG TGTGGAGTTC 
CAGAAGCGGG CGGCGAGCGT GAATCCGATG GCTGACCCGG AGCGAGGCGA TCCTCGTGCA 
GAACTCACGC AGGAGCAGTT AGCGGCGGTG AACAAGCAGT CGATGCGGCT GGCGAAGAAA 
CTGGATGGCT GGTCGCGAGC AGCGATTGGT CGGCGGCTGG GTGAAGCCGT CGTCGGTGGG 
AAAGACCTGA CGAGTGCGGT CGTCGGGGTG TTCGAGGAGT TGCAGACGGC ACCTGGGACG 
GTGATTCCCA TTGGGAAGCT CGAGAACGTC AATCGCAAAG AGGTGAGCAT CGAGGGCCGA 
GTCGAGGTGC TCTGGGATGC GGACTCGCCG GCCATCGCGC AAGTCGGGCT AATCGCGGAC 
GACAGTGGGA AAACGAAGGT GACGTCATGG GTTGCGAGTG ACCAACCCTG GATCGAAGAG 
GGCGAGCGCG TGCGGATTCA CGGAGCGGCG AAGAACTGGT ACAATGGGCG CGTCTCCGTG 
GCTCTAACCG GGTGGAGCAC CGTTCACTTC CCCGAGCGCG GTCGGTGGTG GGAAGCGTAG
 
Protein sequence
MSSNSSSSKV VTVDEQAFEK AGGQTVDEDG FPVVDETPEF RATVDMEVQA KVDSNHPDAR 
VEEGPDHMFG KTLEQEERIE AREAELEHIS AQAELSQQEG RAKRTRDIAA KRSAERRVEF 
QKRAASVNPM ADPERGDPRA ELTQEQLAAV NKQSMRLAKK LDGWSRAAIG RRLGEAVVGG 
KDLTSAVVGV FEELQTAPGT VIPIGKLENV NRKEVSIEGR VEVLWDADSP AIAQVGLIAD 
DSGKTKVTSW VASDQPWIEE GERVRIHGAA KNWYNGRVSV ALTGWSTVHF PERGRWWEA