Gene Hlac_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3116 
Symbol 
ID7399247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp363486 
End bp364307 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content65% 
IMG OID643706918 
Productzinc finger SWIM domain protein 
Protein accessionYP_002564540 
Protein GI222476019 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACC GCTATCTCAC GACGGTTCTC AAGGAAGCCG AGCGCGTCGC CGAGCAGCAC 
GACCAGGTCG CTCGAACGGC GGACAACCAA GCCCACGAAT ACCTTCGATA CGCCGTCCTC
CGGGTGCTCG AAAGAGAGGC GGACCACCTC CCGTCGGACT GGACGCCGAT CGACGGCGTA
ACCGTTGGGT ATGGGGAGGA TGAGGCGATG TTCGACAGTT GGGGCTCCAG CGAAGACTGG
TGGGAAACAG TCCCGCCCCA GGAAGCGTGT ACCCGCTTCC GCGTGTTCTT CCCGGACGAC
CACCAGACGG TTCCCCGTGA CATCGTCGAC GTGATGGCCG CGCTCGGGAC CTGGCGAGTG
TGGACCGGGA GCGCAACCGC GTGCGGCTCC TACGACCATC GCGAGCGCCG TGAGGTCCAC
TACCTGTGGT CGGAAGGCCA TCCGGTGGAG GAAGTGCTCC ACGAGCGGCT CAGTAGCCCT
GCGGAAGCCG TCGCTCCAGA CGGTGGTCGG ACTGGCGACG TCCGCGACCG GCTGGTCGTC
GACGATGATC CACAGCCTCA GGATGACCTC GAACCACGCA CGAAGCGTGC CATCGACGAA
GCGATGGACG TCTCGCTCCT CTCGAAAGGT GGTCGCTACG AGGTCCAGTC CGCGTCCGGT
AATTGGTACG AAGTCGACGT CGTCGACGAG TCGTGTACCT GTCCCGACTG GCAGCAGCGC
TCACCAGAGG GTGGCTGCAA GCATCTACGT CGCGTCGACC ACGAGATCAA ACGACGCCGT
GTGCCCCGCC CAGATGGCCG ACTCCCGGCT GACGTGAACT GA
 
Protein sequence
MTDRYLTTVL KEAERVAEQH DQVARTADNQ AHEYLRYAVL RVLEREADHL PSDWTPIDGV 
TVGYGEDEAM FDSWGSSEDW WETVPPQEAC TRFRVFFPDD HQTVPRDIVD VMAALGTWRV
WTGSATACGS YDHRERREVH YLWSEGHPVE EVLHERLSSP AEAVAPDGGR TGDVRDRLVV
DDDPQPQDDL EPRTKRAIDE AMDVSLLSKG GRYEVQSASG NWYEVDVVDE SCTCPDWQQR
SPEGGCKHLR RVDHEIKRRR VPRPDGRLPA DVN