Gene Hlac_3042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_3042 
Symbol 
ID7399017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp300771 
End bp301769 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content61% 
IMG OID643706850 
Producttransposase IS4 family protein 
Protein accessionYP_002564472 
Protein GI222475951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCTACGA GCGCCAGCAT CCTGCAAGAG GAGACTTCTA TCGACGAGTT CTTCAATGTA 
ATGGCGACCG AGACGCTCGC GTTGTTCGAG CATCTTGAGT TCGACTTTCT CGAAGAATTC
GATGTGTTCG CCCCCGCTCG CCGGGGGCGA ACACGAGATC ATCACCCACC AGCACTCTTC
CGAGCGTTCC TGCACTGCTA CTACAAGAAC GTCTACGGCA TCCGTCCAGT CACGCGAGAA
CTCCAGAACA CGGTCGTCTG GCTCAGCTGT GGCTTCGATC GACCGCCGTC GAGAGACGCG
GTCGATCGCT TCCTCACCGA CCTCGAACAC GTCGTCGACG AGGTCTTCGA CCGCCTCGTC
GAGCAGGCCG CCTGCCGCGG CCTGCTCGAC TTGACCTACT CCATCGATTC CACCGACGTG
AGGACGATGC CCGCCGACCA AGACGCGTCG AAAGGCTACG ATCCAACCGC CGAAGAGTAC
TACCACGGCT ACGGCTGTAC GATCGTCTCG ACCGGGCAAA AGATCCCGAT TGCCGCGGAG
TTCACCGAGA GCAAGCAAGC GCCAGAGGAG ACGGCGATGC GCGTCACGTG TGACGCGCTC
GCCGTCGAGA AACCGATCTG GATGCTTGGA GACAGCGCCT ACGACACGCT CGGCTGGCAC
GACCACCTGC TGGCCGCAGG GGTCGTGCCA GTCGCTCCGT ACAACGCACG AAACACCGAC
GATCCGAAAG ACATCGAGTA CAGGGTCGAA GCCCGCATCG ACGAACACAG CGAGGACGTT
CAGCTGAAGC AATCGACGCT AGACGAGACG TACAACCGCC GGAGTGGAGT CGAACGAACC
AACGACGCCG TCAAGGACTG CGGCCTCGGG CACGTTCGCG CCCGAGGCCG CGTCCACGCA
CGAGCACAAG TGTTCCTCGC GCTGTGCCTT CGTCTCGTTA TTGCGATCAC CAACGACGAA
CGCGGAGACA ATCCAGGAAG CACCGTCATC ACGCTATGA
 
Protein sequence
MSTSASILQE ETSIDEFFNV MATETLALFE HLEFDFLEEF DVFAPARRGR TRDHHPPALF 
RAFLHCYYKN VYGIRPVTRE LQNTVVWLSC GFDRPPSRDA VDRFLTDLEH VVDEVFDRLV
EQAACRGLLD LTYSIDSTDV RTMPADQDAS KGYDPTAEEY YHGYGCTIVS TGQKIPIAAE
FTESKQAPEE TAMRVTCDAL AVEKPIWMLG DSAYDTLGWH DHLLAAGVVP VAPYNARNTD
DPKDIEYRVE ARIDEHSEDV QLKQSTLDET YNRRSGVERT NDAVKDCGLG HVRARGRVHA
RAQVFLALCL RLVIAITNDE RGDNPGSTVI TL