Gene Hlac_2982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2982 
Symbol 
ID7398959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp243238 
End bp244083 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content57% 
IMG OID643706792 
Producttrehalose/maltose binding protein 
Protein accessionYP_002564414 
Protein GI222475893 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGGGT TTAGCATGAT TATTTGCATG AAAGATACAC ACTACAAAAC TCGTCGTCGG 
TTCATCACCG GCGTGGGAGC GACCGGTGCA GTTGCGCTTG CAGGGTGTAC TGATTCCAAC
GACAGCGGCT CGTCCGGCGC GACAGCGGGC TCCGGATCCG AATCGATGGC CGATGAGATC
GTGTTCTACA ACTCCGGGTC ACTGGAGTTC GACCCCGGAA CGGAAACGAA CATCGAACGG
TTCGAAGAAG AGACCGGAAT CAGCGTGGAG GTCAACGAGG TTCCGTGGAG CAATCTAAAA
ACCAGCCTCA CCACGATCTG GCGGAACGAG GACAACAAGG TCGACGCGTT CAACGGTCCG
ACGTGGTGGC TCGCCGACTT CGTCAGCTCC GGATGGCTCG AACCGCTCGG ACTCGGCGAT
GACCACATGT CTAAGTTCCC GGATTCGCTC ACGAATCTGG TTCAGTTCGA CGGTCAGACG
TATATGGCCC CGGAGTTCGG CAAATGGGGC AGCTACCTCT ACGACCAGCA GTATCTCGAA
CAACAGGGAT TCGAATCACC ACCGGACACG TGGGACGAGG TGCTTGAACA GGGTGAACAG
CTCGCGAGCG ACGACAAGGC GGGCTTCGCG TTCACGTGGT CCGATAAGTC AGTGTTCACG
TTCAAGCAGT TCCTGTATCA GGCGGGCGGG CAGCTGTTCA ACGACAGCAA CGAACCAACG
TTCGTCGAGG AGGGCGTCGA AGTGTTGGAG TTCTTCGACC AACTCCGCGA GCGGAACATC
ATCCCCGACG GCATGTCCAG TCTCAGTACT TCACAAAGCC GCTTAGTTAG AACGTCTGCT
TGCTGA
 
Protein sequence
MYGFSMIICM KDTHYKTRRR FITGVGATGA VALAGCTDSN DSGSSGATAG SGSESMADEI 
VFYNSGSLEF DPGTETNIER FEEETGISVE VNEVPWSNLK TSLTTIWRNE DNKVDAFNGP
TWWLADFVSS GWLEPLGLGD DHMSKFPDSL TNLVQFDGQT YMAPEFGKWG SYLYDQQYLE
QQGFESPPDT WDEVLEQGEQ LASDDKAGFA FTWSDKSVFT FKQFLYQAGG QLFNDSNEPT
FVEEGVEVLE FFDQLRERNI IPDGMSSLST SQSRLVRTSA C