| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2964 |
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| Symbol | |
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| ID | 7398943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012028 |
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| Strand | + |
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| Start bp | 215579 |
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| End bp | 217714 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643706776 |
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| Product | transfer complex protein |
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| Protein accession | YP_002564398 |
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| Protein GI | 222475877 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAACC AAATCCTCCA GTCGGGTAGC GAGGCTGTCG GCCAGTTAGT GGAGTGGCTG
TCGAATCCGA TCGCAGCTGA AGGCGCCGCC CTCTACGTCG GCATCGCGGT TGTTCTCGGC
GTCGGTGGGA CACGGCTCTG GGACTGGTAC TCCGAAGATG ACGACGAGGA AGTCGCATTC
TCAGATCTCC TCGACGAGGA GACACTCAAA GACGGCAAGG CCGAACGGCA ACTGCTCGAC
GACATCGCCG AATCACACAA GACGATCACC GCACCGGCCG CCATCGAATG GGACACACGA
GCCGCACGCG TCGGCGAGCA GTGGACGACG ACGCTGTACA TCACTGAGTA CCCGGACTAC
CCGAACGACG GGTATCTGAG CGACCTTTTC GAGCTGACCG ATATCCAGTT CGACCTGACG
GCGCATCTCA CCCCAAAAAA TCAGGAGCGG GCGCGGAACG AACTGCAAGA GATCGCTGAT
GATCTCCAGG TGGATGCTGA TCTCGAACAG AGCGTTCGGA GTACCTACCT GCAAGAGCGC
GCCAACGAAG CCGCCGCGAC CTACAAAGCC GTCGAGAACG GCGCGCGTGT CTTCGATCAA
GGGCTGTACG TGACGGTGCG GGCCGACGAG AAAGACGACC TCCGAGATGC CGTCCAGACA
GTCACCAGTG CGCTCCGTGA TGATCCAGCG AACCTCACGC CGAAGACGGC GATCTGCCGG
CAAGACCTCG CCCTCCAGTC TGCCGCACCC ATCGGCAAGA ACGTGTTCGG ACGCACATCG
ATCGCGCTCG GGGGCGCCGT CGGCGCGATG CTTTCCTCAC CACACAACGC GACGATTCTC
GAAGAGGGTG GCGTCGAATT CGGAATTCAC AAAGATACCC AGAGTCCGGT CGTCATCGAT
CCGTTCGCCC GGGAGAACGG CTATGCGATG TTCACGGTCG GGGACACGGG CTCAGGGAAG
TCGTTCAGCT CGAAGCAAAA CTTCATCCGC TCGATCGAGC AGAGCAAGGA CCGCATCGGA
ATCATCCTCG AACCGCTGAA CAACTGGGCC GGCGTCGCCG AAGCTCTCGG CGCCAAACGC
ATCACGGTCG GCGGAACGCT CGGGCTAAAT CCCCTAGAAA TTCGCGAAAC CCCCGAACAC
GTCCAGCGGG CGATGGGTGA GGACGCGAGT CCCTTTAACG AAAAACTCGA TGACGCGATG
AGTTTCCTCA CGAACTTCTT CGCACTGCGG GGGATTTCAC TCGGGGATCG ACGGACGACG
CTCGAACTCG GGCTCAAGCG TGCCTACAAA CGTCAGGGGA TTACGGACGA CATTGCCACG
CACAGCAACC CGAGCCCGAC CATCCGCGAC ATGCTGGATG TCTTCGAGGA CATGATCGAC
GACCCTGAGG CGTTCATCGT CCGATCTGAC GAGGAGACAG AGAAGATCAC AGAGGATGCA
ACGTGGCTAC TCGATCAGCT TCGCCCCTTC GAAGGGGGCG GTCGCCACGC CAATCTCGGT
CAAGCGTCGG ACTTCGACAT CCACGACGAG AAGGTCATCT ACCTCGATCT CGCCCAACAG
GAGGGTAGCG TCGACAGCAG CACGGCGCTG ACGATGCAGC TGCTCATCTC GCTGGTGTAC
GAGCGAGCGA AGATATCGGA CACAGAGGTC GTGTTCTACA TCGATGAGGC ACGCTACATC
ATGCAGGATG CTGCGAGTCT GGCGTTTCTT GAAACCGTGT TCCGTCACCA TCGGCATCAC
GATCTGTCTA TCCGGCTGGT CACCCAAACC GTCGATGAGT TCTTCGAGCA CGCCGAAAGC
GAGGCCATCC TCGATCAGTG TGCCGTCAAG CAGTTCCATC GCCTCGACGG GATGGACGAG
GCGTGGGCCG CCGAATTCGG GTTGAACTAC GCACAGATGC GGTTCGTCCA GGATGCGGTG
CCCGGCAACG AGGATGCCGG CTTCGCTGAG GCGCTCATCG GCGTCGACGG CGAGTGGCGC
GGCATCCAGG TCACAGCGAT GCCCAACGAG AAACGGGTCA TCGACTTCGA CCCAGCCACC
CAAGAACTGG CGTCGCTTCC GGGCGCCGGC GACACCATCG AGAGCGAACG GGCAGCGTTC
CACACCGCAC CCACTCACCG AGCACCGAAC AAGTGA
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| Protein sequence | MDNQILQSGS EAVGQLVEWL SNPIAAEGAA LYVGIAVVLG VGGTRLWDWY SEDDDEEVAF
SDLLDEETLK DGKAERQLLD DIAESHKTIT APAAIEWDTR AARVGEQWTT TLYITEYPDY
PNDGYLSDLF ELTDIQFDLT AHLTPKNQER ARNELQEIAD DLQVDADLEQ SVRSTYLQER
ANEAAATYKA VENGARVFDQ GLYVTVRADE KDDLRDAVQT VTSALRDDPA NLTPKTAICR
QDLALQSAAP IGKNVFGRTS IALGGAVGAM LSSPHNATIL EEGGVEFGIH KDTQSPVVID
PFARENGYAM FTVGDTGSGK SFSSKQNFIR SIEQSKDRIG IILEPLNNWA GVAEALGAKR
ITVGGTLGLN PLEIRETPEH VQRAMGEDAS PFNEKLDDAM SFLTNFFALR GISLGDRRTT
LELGLKRAYK RQGITDDIAT HSNPSPTIRD MLDVFEDMID DPEAFIVRSD EETEKITEDA
TWLLDQLRPF EGGGRHANLG QASDFDIHDE KVIYLDLAQQ EGSVDSSTAL TMQLLISLVY
ERAKISDTEV VFYIDEARYI MQDAASLAFL ETVFRHHRHH DLSIRLVTQT VDEFFEHAES
EAILDQCAVK QFHRLDGMDE AWAAEFGLNY AQMRFVQDAV PGNEDAGFAE ALIGVDGEWR
GIQVTAMPNE KRVIDFDPAT QELASLPGAG DTIESERAAF HTAPTHRAPN K
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