Gene Hlac_2928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2928 
Symbol 
ID7398912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand- 
Start bp182872 
End bp184107 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content59% 
IMG OID643706745 
Producttransposase, IS605 OrfB family 
Protein accessionYP_002564367 
Protein GI222475846 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCACGC TCACGAAGAC GCTGGAACTG AAACTGGTAG AGCCGAACGC GCACAAGCGG 
AGAAAACTCC GCGAGACGCG AGAGGCGTAC CAACAGGCGC TTCACGACGC CTTCGACGCT 
GGCTGTACCA CACAGACCGA AGCGAACGAC GTGGTGGTCA ACTACAAGCT GAGTGGATAC 
GCAAAGAATG CGCTCAAGAA GTACGTCCCG CAACTCACGA CGACGTACAA CGCAGGCGAA 
CTTCACGATG CCCACCCCGT CCGTTTCACG AACGAAGGGC TACGACTCGA CCACAAGCCC 
GAGAACGCTA TCGAGTGGTA CGTCAAAATC CCGCACCACG AGGACTACCA CCTCTGGATG 
CCAGCACAAC CGAATCCCGA ACAACGGGAC TGGTTGGAAG CGTTGAACGC GGGAGACGCC 
ACGATGGGCG AGAGTCGGCT ATTCGAGCGG GACGGAACGT GGTATCTTCA CGTCACCGCA 
ACCCGCGACG CAGAGGGCGG TTCCGAGGTG TCCGACGAAG AACGGACACC CATCGGTGTC 
GATATTGGGG AAGCGTCGCT CGTCACGGTG TGTCACCGTG ACGACCACGG TTGCCCGACC 
GCTCCCGAAC TATGGGCCGA CGAAGGGAAG ACCGTTCGTC GGCTCCGCAA GACCTACTTC 
ACCGCCACGA GGCGACTTCA GACACGCGGT AGCGAACGTA TCGCGGAGTC CTTCGGTGAC 
GACCTGTGGA ACCAGATAGA CGACGTGTTC CACCGCGTCA CCCGCGAAGT CGTGGACTAC 
GCCGAGTCTG TCAAGAATCC CGTTCTTGTT CTGGAAGACC TGACGTACAT ACGGGAGTCG 
ATGGACTACG GCGAGTACAT GAACCGCCGT CTCCACGGAT GGGGATTCGC CAAACTCCAC 
GCGCAGATAC GATACAAAGC CGTCGAGAAG GGTATCCCCG TCAAGACGGT GAACCCTCGC 
AACACCTCGA AAGAGTGCCA TGCGTGCGGT GAGGTAGGAT ACCGCCCACA ACAGGCGACG 
TTCAAGTGTA CGAACGATGC GTGCTGGATG GGCGAGTACC AAGCGGACGT GAACGGAGCG 
GTGAACATCG CAGACCGCTA CCTCAGCGGA GAGAGTCGTT TCAGAGAACA CGAGAACGAC 
GATGACTCGG CTGAGGATGG GGGGCGTTTG ACCGCCCCAC AAGACAGCCA AGCCGATGCT 
ACCAAGCAAG AGACGCTTGG AACGTATGCG TCTTGA
 
Protein sequence
MTTLTKTLEL KLVEPNAHKR RKLRETREAY QQALHDAFDA GCTTQTEAND VVVNYKLSGY 
AKNALKKYVP QLTTTYNAGE LHDAHPVRFT NEGLRLDHKP ENAIEWYVKI PHHEDYHLWM 
PAQPNPEQRD WLEALNAGDA TMGESRLFER DGTWYLHVTA TRDAEGGSEV SDEERTPIGV 
DIGEASLVTV CHRDDHGCPT APELWADEGK TVRRLRKTYF TATRRLQTRG SERIAESFGD 
DLWNQIDDVF HRVTREVVDY AESVKNPVLV LEDLTYIRES MDYGEYMNRR LHGWGFAKLH 
AQIRYKAVEK GIPVKTVNPR NTSKECHACG EVGYRPQQAT FKCTNDACWM GEYQADVNGA 
VNIADRYLSG ESRFREHEND DDSAEDGGRL TAPQDSQADA TKQETLGTYA S