Gene Hlac_2921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2921 
Symbol 
ID7399152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand+ 
Start bp178094 
End bp179254 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content60% 
IMG OID643706740 
Producthistone deacetylase superfamily 
Protein accessionYP_002564362 
Protein GI222475841 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAG ACATCACCGT TTATTGGGAC GATCAGATGC TCGACCACGA ACCGCCGAAA 
GGGGCCTTCA AATTCCCCTT TACACCCATT GTCGCGGTCC CTGAAGTACA CCCGGACCGT 
CGTGAACGCG TCCAGAACAT CCGGGCGATG CTTGACCATG CCTTCGGTGA CATCTTCGAG 
ACCGTCTCGC CGGACCCGGC AAGCCGGAAA GCGATCGAAC GCGTCCACGA TCCCGACTAT 
CTTGACTGGC TCGTCGAGTT TTGTGCTGAT GGCGGCGGCC GCATCGAAGA CACGACGACT 
GGATTGAACG AGCACACGTA TGACGCCGCT CGCGTCTCAG CCGGGGCTGC CATCGCTGCC 
GCGGGACAAG CGCTTGACGG GTCGAAAGAC GATGGGCAAG AGGCGCTCCC CTATGCGCTG 
TGTCGCCCCA GCGGCCACCA CGCCCAGCCC GATTGCGCAG ACGGATTCTG TTACCTCAAC 
AACGTCGCGC TCGCAGCGGA GGCTGCGCTC GCTACTGACG GACCGGCCGA CATCACAGCC 
GACCGGGTTG CGATAATCGA CTGGGACGTC CACCATGGTA ATGGTACACA AGAGACATTC 
TATGACCGCG ATGATGTGCT CTTCGTGAGC GCGCACAACG ATCACGGCTC CTGGCACCCT 
GAGTACCATC CACAAGAGGG CTCGATTGAG GAGTTTGGCG AGGGTGACGG TGAGGGGTAC 
ACGCTCAACG TCCCGCTTCC GCCCGGCACG GGTAACCGGG GTTACGAGGC ATTTTTCGAA 
CGGATTGTTA ATCCGGCGAT TACTGGGTTT GACCCAGACC TCATCCTCGT CAGCGCTGGC 
CAGGATGCTG GACCGTCGGA CATGAACGGT CGAAATATTG TGACCCGTGA GGGATTCCGG 
AAAATGGGCG ACAGGGTCCA ACAGCTCGCC GATGAGACGG CAGACGGCGC GCTCGCACTG 
ATTCAAGAAG GTGGCTATCA GCCATCTCAC CTCTCGTTCG CTACGCTTGG TGTCTTCGAA 
GGCGTTCTTG GTCGCACAGT CGACCTTGAT GGGTATGGGA CCGGCGACCC CTTCGAATTC 
CTTGACGAGC CGACCGAACT GGTCGACGAG TGGCTCGATC AAGCAGTCGA CCATCATGGT 
AAATCGCCCG TTTTCGCCTA G
 
Protein sequence
MTTDITVYWD DQMLDHEPPK GAFKFPFTPI VAVPEVHPDR RERVQNIRAM LDHAFGDIFE 
TVSPDPASRK AIERVHDPDY LDWLVEFCAD GGGRIEDTTT GLNEHTYDAA RVSAGAAIAA 
AGQALDGSKD DGQEALPYAL CRPSGHHAQP DCADGFCYLN NVALAAEAAL ATDGPADITA 
DRVAIIDWDV HHGNGTQETF YDRDDVLFVS AHNDHGSWHP EYHPQEGSIE EFGEGDGEGY 
TLNVPLPPGT GNRGYEAFFE RIVNPAITGF DPDLILVSAG QDAGPSDMNG RNIVTREGFR 
KMGDRVQQLA DETADGALAL IQEGGYQPSH LSFATLGVFE GVLGRTVDLD GYGTGDPFEF 
LDEPTELVDE WLDQAVDHHG KSPVFA