Gene Hlac_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2860 
Symbol 
ID7399096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp119322 
End bp119960 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID643706680 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_002564306 
Protein GI222475785 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACTG ATCGACTTGA TCGAATCACG GACGGCGGGG TGATCGCGAT CCTCCGCGGT 
GTCAACACGG CCGACGCCGT AGCGGTCGCG GACGCCGTCG TCGACGCCGG CGTGACAGCA
CTGGAGATAA CGGCGGACAC ACCGAACTCG ATGTCGTCGA TCGAAGCGAT ATCGGACCGC
GTCGACGACG CGCTGGTCGG CGCCGGTACC GTGCTCGACG CGGAGACGGC GCGAGCGGCA
CAGTTGGCCG GTGCGGAGTT CCTCGTAACG CCGACGGTGA ACCGCAACGT CATCCGGACG
GCGAACCGCT ACGGAACGCC GATCGCGGTC GGCGCGTACA CGCCGACCGA GGCGCTTGAG
GCCTACCAAG CTGGTGCCGA CGCGGTGAAG GTGTTCCCCG CAAAGACCGG CGGCCCAGAC
CACGTCGCGG CGATCGGTGG TCCCCTCCCG CAGATCCCCC TCGTCCCGAC TGGCGGCGTC
AGTGCGGAGA ACGCGGGCGC GTACGTCCGG GCCGGCGCAG TCGCGGTCGG CGTCGGTGGT
TCGATCGTCG ACCACGAGGC GATCGACGAC GACGCGTACG ACCAGGTCGA GGCGAACGCG
CGAGCGGTTG TCGAGGCCGT CTCGGCGGCC CGAGACTGA
 
Protein sequence
MRTDRLDRIT DGGVIAILRG VNTADAVAVA DAVVDAGVTA LEITADTPNS MSSIEAISDR 
VDDALVGAGT VLDAETARAA QLAGAEFLVT PTVNRNVIRT ANRYGTPIAV GAYTPTEALE
AYQAGADAVK VFPAKTGGPD HVAAIGGPLP QIPLVPTGGV SAENAGAYVR AGAVAVGVGG
SIVDHEAIDD DAYDQVEANA RAVVEAVSAA RD