Gene Hlac_2828 details

Gene Information

• Locus tag: Hlac_2828
• ID: 7398867
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorubrum lacusprofundi ATCC 49239
• Kingdom: Archaea
• Replicon accession: NC_012028
• Strand: +
• Start bp: 88989
• End bp: 91067
• Gene Length: 2079 bp
• Protein Length: 692 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 643706653
• Product: transposase IS4 family protein
• Protein accession: YP_002564279
• Protein GI: 222475758

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGCCA CTCCCGACTC AAAACAAGCG GTTCTCGACT CTCTGTCTGA GTCCCATCGG 
GAGTGGCCAT ACTCGACTAA CCACGATACA GTGAATAACG ACCCGTGGCC GCTCGCTTGG 
GATGCTGCTG CATTCATTGA GGAATGGTTC TCTCATCCTG AGCATACCGA CGTGGAAGAA 
GCGATCTGCC ACATAGAACT CGACCCGTCA GGGTTCGGGT ACGATGTCAC TGACTGGCAT 
TTCAAGCAAC CTCCAGAACC GTTGTTGAAG GCGCACCTTC TTCGAATCGT CAAAGGTTGG 
GGCGGCGAAA CTGCACTCCA CGACTACCTT GACGATAACA CCGAGTTAGT AGCTGCACTA 
GGGTTCGGAA ACGGGCTTGC ATCGAAAACT ACGCTCTGGC GAGTCTGGAA CGAGAATCGA 
CTTTCAGACG ACCACAAGCA AGTCGTCCGA ACCATCGGCC AAGTGCTTGT CAACGTAGCA 
CGAGAACACG GTGTCCCTGC TCCCGATGAG GTGTTCTACC CCGACCCGAG TGTTGACGCT 
CCAAATGCAG TCGCACAGGA TGATTTGACA GTCCGAGACC GGACGATTGC AAAAACACGG 
GATGTCTGGA AGCAAGCGAA ACCAATGGTG ACTGAGAATT ATCAGTTGCC GCGTGGAAAG 
AATACAGAAA TCCATCAGAA CGCGTTCTTT GAAGCACACG CGTTCATGGG GTCGCGTGAA 
GAGATGTACG CGGAGGATGG GACGGTGAAC TTTGCTGCAG ATACCACACG CGAACGTGTA 
CAGACTGGCA GTACTCATCG CCACCACTTG CACAAGATTG GCCCGACAGA TGCTCGTCAG 
ATGCATCGTG ATGCGACACG AGAGTTAATT GAGCGTGCTC GCCGTGATTC TGAACTCGTT 
GGAGGGGTCC TGGTCAGTAT TGATATCACG AAATCGAACC CGTACAGTAC AAAAAAGAAA 
ATTGAGTCTG ACGAGGCTGG GAATGTGACA AACAAGTGGC TACTCGGCTA CAAAAACGAC 
GATAAAAAGT CCACAGAGTT CTATTTCCAG TGGGCAAGCG TCCAAATCGT CGGATTAGAT 
ATCCCGCTTG TACTTGATGC GATTCCGGTT CACCGTGGCC TGAAGCGTGC TACCATCGTT 
GATCGGTTAC TGGAGAGTGC AACGGATCTC GTTGATGTCG AAATGGCAAT GATGGACCGG 
GAATTCGCTC ACGATGCAGT CAAGGACGTA TGTGATGATC ACGAGGTCTA CTATTTGAAT 
CCGGGTAAAA TGAGGACCAG TGAACGTGCA ACGTGTACCC GTCTTCGCCG TCAGGGTAAA 
CTCATTCATA TTGAGAGTGA CGAAGACACC GACAGCAGCA CGGACGAAGG ACGAACGACG 
CTTACGGACT TCACGTCTGG TGAGGAAGAT TCCGATGAGG AAGCGGGTGT TGTTCGGAAG 
CGTGTGTATG TCCCTGCAAT AAACGCTGAG CGAACCGGTG ACGATGGCGA TGATGATTCA 
GATGAGACCG ATAGTGAGGA TGGAGACAAC GAGTCAAACG ATAAGGATGA GCTGCGCCAA 
GAGTTGCTAC ATGAGTTCTC AGAAGTAAAG GATTCAGATG CGGAAGAGAT CGAGCAGCTG 
TTCGGTGACG TGATTGATGA GGTCCGAGAC GAGGAAGACA AGCGAAAGCT CCCGGGGAAT 
AAGGAGGACA AGGACCGGTT TATGTTGTTC GAGTCGAATC ACCCGGCTCT TGAAATCCCA 
GAAAACAGTG ACAATGGTGA GGAGCCTATG TCAGAGACGG AGAAGGCACA CATGGTGAGT 
CGTGTTCTGC GTAAGTACAA GCACCGGTGG GGGATTGAGA ACGGATTTAA GCAAATCAAG 
AGTTTCCGTG TTCGGACTAC GTCGATGAAT CCTGAGTATC GGTTTTTCAA CTTCCTATAC 
GCGTGCACGC TGTACAACGT GTGGAGATTG ACTGATTTGC TAGTCAAGTT GGAGCTATTA 
GCGGAGTCTG AGTTTGAGTA CAAACCCCTT GTGACAGCAG ACCTCTTCCT GACGATTGCG 
AAGGAGTACA ATATCGTTGG GTTAGACCCT CCCGACTAG 

 

Protein sequence

MTATPDSKQA VLDSLSESHR EWPYSTNHDT VNNDPWPLAW DAAAFIEEWF SHPEHTDVEE 
AICHIELDPS GFGYDVTDWH FKQPPEPLLK AHLLRIVKGW GGETALHDYL DDNTELVAAL 
GFGNGLASKT TLWRVWNENR LSDDHKQVVR TIGQVLVNVA REHGVPAPDE VFYPDPSVDA 
PNAVAQDDLT VRDRTIAKTR DVWKQAKPMV TENYQLPRGK NTEIHQNAFF EAHAFMGSRE 
EMYAEDGTVN FAADTTRERV QTGSTHRHHL HKIGPTDARQ MHRDATRELI ERARRDSELV 
GGVLVSIDIT KSNPYSTKKK IESDEAGNVT NKWLLGYKND DKKSTEFYFQ WASVQIVGLD 
IPLVLDAIPV HRGLKRATIV DRLLESATDL VDVEMAMMDR EFAHDAVKDV CDDHEVYYLN 
PGKMRTSERA TCTRLRRQGK LIHIESDEDT DSSTDEGRTT LTDFTSGEED SDEEAGVVRK 
RVYVPAINAE RTGDDGDDDS DETDSEDGDN ESNDKDELRQ ELLHEFSEVK DSDAEEIEQL 
FGDVIDEVRD EEDKRKLPGN KEDKDRFMLF ESNHPALEIP ENSDNGEEPM SETEKAHMVS 
RVLRKYKHRW GIENGFKQIK SFRVRTTSMN PEYRFFNFLY ACTLYNVWRL TDLLVKLELL 
AESEFEYKPL VTADLFLTIA KEYNIVGLDP PD