| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_2824 |
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| Symbol | |
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| ID | 7398866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012028 |
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| Strand | - |
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| Start bp | 84537 |
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| End bp | 86741 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643706650 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_002564276 |
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| Protein GI | 222475755 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3291] FOG: PKD repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGAAG ACACGTCCAC ATTCACCACG AAAAAACAGG GAATGGCGAG CAGTGATGAG
TTCAAGTGGG GAGAGGGCGG TTCGTCGTGG GAAGAGGAAA TTAACGAGAG CAACGGGTTC
GGCATGAAGA ACGGGAACGT CACGATCGCG CGGCCACCAG AAGCTGCGGT GAGTGTAGAC
GTATCGACTG GTGATCTCGA TACGACGTTC TCGTTTGATG CGACCGGCAC TACCGATCCA
ACAGATACGT CAATTTCGTA CGAATGGGCA TTCGGTGACG GTACAACAAA ATCCGGGGCT
GGTGACACAG TCTCTCACTC GTTCAGTACT GTTGATTCCT TCACTGTCAC AGTTACCGCG
ACGAACGAGT ACGGGAATAC AGACACAGCC TCGGTCACGG TCACTGTAGA ATCGCGTCCG
CCAACGGCCT CGTTCACCGC AGACCAAACA ACCGGAAACA CAGACACGAC GTTCTCGTTT
GACGCAAGTG GTTCGACCGA TCCCGATGGA GAGGCGTTGG CATACACCTG GAACTTCGGA
GATGGGGCGA CTGAAACTGG AGAGACGACG CCTCACTCGT TTAGCGAACC CGGAGATTAC
ACAGTCGAGC TTATCGTTGA AGACGAGTAC GGGAACACGG ACACAACGAC TACACCAGTC
ACGGTTAATT CGCGGGCCCC GGATGCGTCG TTCACTGTTT CCCCGTCTAC TGGTGATGCT
GATACCTCGT TCTCGTTCGA TGGGAGCGGA TCGAGTGACC CTGACGGGTC CACGATCACG
TACGAGTGGA CGTTCGGTGA CGGCGCAACC GCAACCGGAG AAACCACGCC GCACTCGTAC
GCGACTCCTG GTACTTACAC GGCTGAACTG ACCGTCACGG ACGCGTACGG AAACTCCGAC
ATAGCAACCA CTTCAATCAC GGTTGAATCT CGGAACCCGG ACGCATCGTT CACTACTGAC
TCGACCACCG GTAATGCGGA TACGACCTTC GCATTTGATG GGGCTGGTTC GAGTGATCCG
GATGGTTCTA CGCTCACGTA CGAGTGGGCA TTCGGTGACG GTGCAACTAC GACCGGCGAA
ACGACATCAC ACTCGTACGC TGATCCTGGT GACTACACCG TTGAGTTGAC TGTTACCGAC
GAATACGGGA ACACCGATAC GGCAACCAGC ACTATCACTG TCACCTCCCG TACGCCGGAT
GCCTCCTTCA CAGTTGACCC GAGTACCGGG ACCGCTGACA CCTCGTTCTC CTTCGACGGG
AGTAGCTCCT CAGACCCCGA TGGGTCCATG CTCACGTACG AGTGGGACTT TGGTGATGGC
GCAACAGCCA CAGGCGCGAC GACGTCACAC TCCTACGGCA CGCCGGATGT GTACACGGTC
ACGTTGACTG TTACAGACGA GTACGGAGCC AGTGCATCTA CTTCGAAGAC TGTGGAAGTG
AACGATCTAC CCTCGGCTAG CTTCACGTAC TCGCCGAGCG ACCCGACAAC TGACGACACG
ATCTCGTTCG ATGGCTCTGG TAGTAGTGAC TCTGATGGAA CAATCAGTTC CTACGCGTGG
GACTTCGGAG ACGGAGCAAC TGCAACAGGA AAGACCGTGT CTCACCAGTA TGCAGACTCG
GCAACGTACA CCGTGGAGCT CACTGTCACT GATGATGACG GTGACTCTGA TTCGACGACC
AGGAACCTGT CTGTTGAGGC TGGCGGTGAA CGGACCAGCG GGATGAGCCA GTACATTCAC
GAGGATCCAG AAGCATCCAC CTCATTCTCC ACGAACTCGA ACAACTGGCA ATACGACATC
GACCTGGACG GGACTGGCGG CGGCGGTGAA ATCATGGTCG GGACAACCGG CGGGCAAATC
GACCTCTCGG ATGTGGAAAC CGTATACGTT GATTGGATGC TTGACTACGG CGGCCGAGGG
GCAGTTAACA TCGGGATTGA CTCAACGCTC TCGAACATTC ACGATGAGAA TGTTGATGGT
GGAAATCTTG ATGCCTCCTA CCAACACAAG AATTCCAGTA GTTTCTCCCG ACGCACAGAT
AGCCTGAACA CGTCTGGTAT CAGCGGGACC CGGCATATCG GTGTGGGGCT GCAAGCTTCG
TCGTCGGGGT CCTACGATCA CAGGTTGTAC GTCTACAGCA TATGGGGCGT CGATAGTAAC
GGAAACACTG TGTTCACGAT CGTGATCCCG GACTCGATTA ACTAA
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| Protein sequence | MAEDTSTFTT KKQGMASSDE FKWGEGGSSW EEEINESNGF GMKNGNVTIA RPPEAAVSVD
VSTGDLDTTF SFDATGTTDP TDTSISYEWA FGDGTTKSGA GDTVSHSFST VDSFTVTVTA
TNEYGNTDTA SVTVTVESRP PTASFTADQT TGNTDTTFSF DASGSTDPDG EALAYTWNFG
DGATETGETT PHSFSEPGDY TVELIVEDEY GNTDTTTTPV TVNSRAPDAS FTVSPSTGDA
DTSFSFDGSG SSDPDGSTIT YEWTFGDGAT ATGETTPHSY ATPGTYTAEL TVTDAYGNSD
IATTSITVES RNPDASFTTD STTGNADTTF AFDGAGSSDP DGSTLTYEWA FGDGATTTGE
TTSHSYADPG DYTVELTVTD EYGNTDTATS TITVTSRTPD ASFTVDPSTG TADTSFSFDG
SSSSDPDGSM LTYEWDFGDG ATATGATTSH SYGTPDVYTV TLTVTDEYGA SASTSKTVEV
NDLPSASFTY SPSDPTTDDT ISFDGSGSSD SDGTISSYAW DFGDGATATG KTVSHQYADS
ATYTVELTVT DDDGDSDSTT RNLSVEAGGE RTSGMSQYIH EDPEASTSFS TNSNNWQYDI
DLDGTGGGGE IMVGTTGGQI DLSDVETVYV DWMLDYGGRG AVNIGIDSTL SNIHDENVDG
GNLDASYQHK NSSSFSRRTD SLNTSGISGT RHIGVGLQAS SSGSYDHRLY VYSIWGVDSN
GNTVFTIVIP DSIN
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