Gene Hlac_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_2780 
Symbol 
ID7399187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012028 
Strand
Start bp35219 
End bp36040 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content54% 
IMG OID643706609 
Producttransposase IS4 family protein 
Protein accessionYP_002564235 
Protein GI222475714 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCCC TCCCGAAGTC ACAGATTCTC CGCTTTACTG AGAAAGCGAT CCATCTGGCC 
CGCCGAGCAG TCTCTCGATA CTCCTCGAAG TTTTCCAAAC ACCGCTATAC ACTTCCACAG
CACGTTGTTC TGCTCTGTTT CAAAGTGCGG AAGAACACGA CCTATCGTGG TCTGCTTGAT
GAACTGATCG AGATGCCACG CATTCGTCGC GCCCTCGGAT TAGCTGAACT CCCTACGCCG
TCAACGCTCT GTAAGGCGTT CAATCGGCTT GATATGGCTG TGTGGCGTGT CATACTGACT
CTCTCAACGG CGCTTCTTCC GACGAGTGGC GTCGTTGGAG TTGATGCGTC AGGGTTCGAC
CGCAGTCACG CCTCGAAACA CTACACGAAA CGCGCCGAAC TCACGATTCA GCAGCTCAAA
GTGACGCTGT TGGTCGATGC GAAGGTGAAC GCGATCATCG ACCTACATGT GACGACGACA
CGAAAGCACG ACAGCCAGAT CGCCCCCTCT TTGATTAAGC GCAATCCCGA GGACATCGAT
ATTCTGCTCG GTGACAAAGG CTACGACGAC CAGAAAATCA GGCGACTCGT CCGTGAATAC
GAGGGTCGCC CACTGATTAA GCACCGTGAG TTCACACCAA TTCATAAGGC ATGGAACACG
CGCTTAGATG CTGATCTTTA CGGACAGCGT AGTCAATCCG AGACCGTCAA CTCTACGCTC
AAGCGGAAGT ACGGTGCGTT CGTCCGATCA CGACGATGGT GGAAACAGTT CCGTGAACTC
ACCATCGCCT GTATCGTTCA TAATCTCGAC CGGTCGCTCT GA
 
Protein sequence
MKALPKSQIL RFTEKAIHLA RRAVSRYSSK FSKHRYTLPQ HVVLLCFKVR KNTTYRGLLD 
ELIEMPRIRR ALGLAELPTP STLCKAFNRL DMAVWRVILT LSTALLPTSG VVGVDASGFD
RSHASKHYTK RAELTIQQLK VTLLVDAKVN AIIDLHVTTT RKHDSQIAPS LIKRNPEDID
ILLGDKGYDD QKIRRLVREY EGRPLIKHRE FTPIHKAWNT RLDADLYGQR SQSETVNSTL
KRKYGAFVRS RRWWKQFREL TIACIVHNLD RSL