| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3512 |
|---|
| Symbol | |
|---|
| ID | 7384638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax ebreus TPSY |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011992 |
|---|
| Strand | - |
|---|
| Start bp | 3761753 |
|---|
| End bp | 3762826 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643656831 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_002554937 |
|---|
| Protein GI | 222112673 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACGG ATCGCATGCA CATCTCACCT CGTATTCAAT TCTCCCTGAA ACTGGCGCTT
ATGGGAGTCG TGATGGCTGC CATTTTCGTG GCAGACACAG CGACGAGTTA TGAAGTTGCG
GCGGCAGTGT TTTACACGGT CGTCATCCTG ACGGCTGTGC GCGTACTGTC TCGACGCGCG
CTGATTGCTC TCGCCGTTAT TTGCATCGTC ATGACCGCAG TCAGCCTTGC GTTCACGCCG
CATGGGAATT TGCGTTCCGG CCTGATCAAC ATGGGAATCA GCATCGTTGC GATCGTGATG
ACGACCTATC TTGTACTCAA GATGGAGGCC GCAAGGACGG CGGCACATGA GGCACAAGCT
CACCTGATGC GAATCGCGCG TGTAAAGAGC ATGGAGGCAC TGACCACTTC CATCGCGCAT
GAGGTCAATC AGCCGCTCGC TGCCATCGTG ACCAGCGGAA ATGCCTGTCA ACGCTGGCTC
GGGCAGGAGC CCCCCAATCT CGACAAAGCG CGCCAGGCGC TTGACCGGAT ACTGAGCGAC
GCTGGCCGGG CGAGCAACAT CATCGCACGC GTGCGCAGCC TCACACGCGG GGAGCCGCCT
CACAAAAGCA AGTTCGATTT CAACAAAGCC ATTCTTGAGA TCATTGCCCT GTCCCAAGCC
GAAATGGAAC GAAACGGAAT CCGGCTGGTG ATGGAGTTGA GTCCTGATCT GCCTTTGGCG
ATTGCAGATC AAATCCAGAT ACAACAGGTG GTCGGCAACG TGGTGCTGAA CGCCATCGAC
GCGTTGGCTC CAGTTCCGGC GCCCATGCGA AGTATTCGGA TCACATCAGA GACAAGGGGC
AACGCCATTG TGCTTGCCGT GTCTGATACC GGCATCGGTA TACCGGCCGA GGTATACGAG
CATTTGTTCG AGGCATTCTG GACTACCAAG GAAGAGGGCA TCGGAGTCGG TTTGAGCATC
AGCAGGGCAA TCATCGAAGC CAATGGCGGT CAGATATGGG CAGCACGAGG TGAACACGGC
GGCGCGGTTT TCCGGTTCAG CGTGCCGATC GCATCGCAGG AGAAACGCCA ATGA
|
|---|
| Protein sequence | MRTDRMHISP RIQFSLKLAL MGVVMAAIFV ADTATSYEVA AAVFYTVVIL TAVRVLSRRA
LIALAVICIV MTAVSLAFTP HGNLRSGLIN MGISIVAIVM TTYLVLKMEA ARTAAHEAQA
HLMRIARVKS MEALTTSIAH EVNQPLAAIV TSGNACQRWL GQEPPNLDKA RQALDRILSD
AGRASNIIAR VRSLTRGEPP HKSKFDFNKA ILEIIALSQA EMERNGIRLV MELSPDLPLA
IADQIQIQQV VGNVVLNAID ALAPVPAPMR SIRITSETRG NAIVLAVSDT GIGIPAEVYE
HLFEAFWTTK EEGIGVGLSI SRAIIEANGG QIWAARGEHG GAVFRFSVPI ASQEKRQ
|
|---|
| |