| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3508 |
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| Symbol | |
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| ID | 7383421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3757497 |
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| End bp | 3759500 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643656827 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_002554933 |
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| Protein GI | 222112669 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGGGA CGAACGTGCT GTTCGGTCAG ATCGCCGTGG TGTTCGGCAT CGTGATCACC
GGCGTGTGGG CGGCCACACA ATGGACAGCC GCCGCCCTGG GCTATCAGCT ACGCCTTGGC
TCGCCCTGGT TCGACTTCTT CGACACGCCC ATCTATCACC CGTGGCGGCT GTTCGAGTGG
TGGTTCTTCT TCGATGCCTA CGCGCCGCGC GTCTTTGACA TCGGTGGTGC CATCGCGGGA
GGCAGCGGCC TCGTGGCCGT GCTGGTCGCC ATTGGCATGT CGATCTGGCG CTCGCGGCAA
TCGCGCCTGG TCACGACCTA CGGCTCGGCA CGCTGGGCGA ACGCGGATGA CATTCGTAAG
GCCGGGCTCA CGCAGCCGAC CGGCGTGTTC CTGGGCCAGC ACGATCGCCA GTACCTGCGG
CACGAAGGCC CGGAACACGT TCTGACCTTC GCGCCCACAC GCTCGGGCAA AGGCGTGGGC
CTGGTGGTGC CGACACTGTT GAGCTGGCCT GCTTCCGCTG TCATCCACGA CATCAAGGGC
GAGAACTGGA GCATCACCGC AGGCTGGCGT TCGCGCTTCT CGCACTGCCT GCTGTTCAAC
CCCACCGATG CGAAGTCGGC AGCCTACAAC CCGCTGCTGG AAGTCCGCCG TGGCGCGCAT
GAAGTGCGCG ACGTTCAGAA CATCGCGGAC ATCCTGGTCG ATCCCGAAGG CGCGCTGGAG
CGACGCAATC ACTGGGAAAA GACTTCGCAC GCGCTGCTGG TCGGCGCAAT CCTGCATGTG
CTCTACGCGG GCGAGGACAA GACGCTGCGC GGTGTCGCCA ACTTCCTCAG TGACCCTGCC
TGCCCGTTCG AGCTGACCCT GCACCGGATG ATGACCACGC CGCATCTCGG CGATGGCCCG
CATCCGGTCG TGGCCTCGGC GGCGCGTGAG GTACTGAACA AATCGGACAA CGAACGCTCC
GGCGTGCTGT CCACGGCCAT GTCGTTCTTG GGCCTGTACC GCGACCCCAC GGTGGCCGAA
GTCACCTCGC GCTGCGATTG GCGCATCGCT GACCTGATCG CGGCCGAGCA TCCGGTGTCG
CTGTACCTGG TGGTGCCGCC TTCGGACATT TCGCGGACGA AGCCGCTGAT TCGCCTGATC
CTCAACCAGA TCGGGCGGCG GCTGACGGAA TCGCTTGATG GCTCCGACGG CATCGCGCGC
CGCCACAAGC TACTGCTGAT GCTCGACGAG TTCCCGGCCT TGGGGCGCCT GGACTTCTTC
GAGACGGCGC TGGCCTTCAT GGCGGGCTAC GGCATCCGCA GCTTCCTCAT CGCGCAGTCG
CTCAACCAGA TTGACAAGGC CTACGGCCCG AACCATTCGA TCCTGGACAA CTGCCACGTG
CGCGTGACCT TCGCCACCAA TGACGAGCGC ACCGCCAAGC GCATTTCCGA GACGCTGGGC
ACCGCGACCG AGCTGCGCGC GCAACGCAAC TACGCGGGCC ACCGACTCGC GCCGTGGCTG
GGCCACCTGA TGGTGTCGCG GCAGGAGACG GCCCGGCCGC TCCTGACGCC CGGCGAAGTC
ATGCAGCTCC CGCCTGACGA GGCGGTGGTG ATGGTGTCCA GCGTGGCCCC CATCAAGGCC
AGGAAGCTGC GCTACTACGC AGACAGCAAT TTCAAACGCC GCGTGTTGCC GCCGCCCGTG
CTCACGGCCG GGCGCTATGC CGACGTGCCG CCATCGCGGC CCGACGACTG GAGCGGGCTG
GCGATTCCCG CCGTGCCCGC CACACCGGCC ACTGCGTCCA CTGACGGCCT GGGCAGCGCC
GACGACGACG GCGGCCCGCG CCGTCAGCCT GAGCTTTCCG AGGCCGTCGC CTACGACCCC
GAGCAGACCA CGCCCGCGGC CGACCTCGCG TTGCTCGATG ACGACGACGA CCTGCCGCTC
CCCCTTCCTC GCCAGCTTGA TCCGGCCATG CAGCGCACGG CCCGGCTGGC TTCTCTCGAC
CCCAACGACG GAATCGAGCT ATGA
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| Protein sequence | MQGTNVLFGQ IAVVFGIVIT GVWAATQWTA AALGYQLRLG SPWFDFFDTP IYHPWRLFEW
WFFFDAYAPR VFDIGGAIAG GSGLVAVLVA IGMSIWRSRQ SRLVTTYGSA RWANADDIRK
AGLTQPTGVF LGQHDRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWSITAGWR SRFSHCLLFN PTDAKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
RRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA CPFELTLHRM MTTPHLGDGP
HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIAAEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIAR RHKLLLMLDE FPALGRLDFF
ETALAFMAGY GIRSFLIAQS LNQIDKAYGP NHSILDNCHV RVTFATNDER TAKRISETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDEAVV MVSSVAPIKA
RKLRYYADSN FKRRVLPPPV LTAGRYADVP PSRPDDWSGL AIPAVPATPA TASTDGLGSA
DDDGGPRRQP ELSEAVAYDP EQTTPAADLA LLDDDDDLPL PLPRQLDPAM QRTARLASLD
PNDGIEL
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