| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dtpsy_3505 |
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| Symbol | |
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| ID | 7382039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax ebreus TPSY |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011992 |
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| Strand | - |
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| Start bp | 3755622 |
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| End bp | 3756008 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643656824 |
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| Product | Conjugal transfer protein TrbC |
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| Protein accession | YP_002554930 |
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| Protein GI | 222112666 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3838] Type IV secretory pathway, VirB2 components (pilins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.232724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCACG TTGATGCTTT CCGTATTTCT GTATATCCGC TTTCCCGCCG CTCCAGCCCC
GCACGGCTGG ATGGCTTGGC TCGCCCGGCC ATGCAAGGCT TGATGCTCGC TGCCTTCATG
CTGCTGCTTG CGGGCACTGC GCAGGCCGCC GGCTCCTCGA TGCCCTGGGA AGGCCCGCTG
CAATCCATCC TCGAATCCAT CCAGGGGCCG GTGGCGCGCA TCGTCGCGGT CATCATCATC
ATCGCCACGG GCCTCGCGCT CGCGTTCGGT GACACGTCGG GCGGCTTTCG CAAGCTGATC
CAGATCGTGT TTGGCCTGTC CATCGCGTTC GCGGCTTCGA GTTTCTTCCT GTCGTTCTTC
AGCTTCTCGG GCGGGGCCGT CGTATGA
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| Protein sequence | MTHVDAFRIS VYPLSRRSSP ARLDGLARPA MQGLMLAAFM LLLAGTAQAA GSSMPWEGPL
QSILESIQGP VARIVAVIII IATGLALAFG DTSGGFRKLI QIVFGLSIAF AASSFFLSFF
SFSGGAVV
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