Gene Dtpsy_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtpsy_3500 
Symbol 
ID7382034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax ebreus TPSY 
KingdomBacteria 
Replicon accessionNC_011992 
Strand
Start bp3750446 
End bp3751798 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content68% 
IMG OID643656819 
Productconjugal transfer protein TrbL 
Protein accessionYP_002554925 
Protein GI222112661 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3846] Type IV secretory pathway, TrbL components 
TIGRFAM ID[TIGR02783] P-type conjugative transfer protein TrbL 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGACG TGACGGTCAT CGACCGCTTC CTCGACACCT TCTCGCGCTA CATCGACTCG 
GGCTTTGGCC TGTTGCACGG CGAAGTGGCG TTTCTGACCG CCACGCTGAT CGTCATCGAC
ATGACGCTCG CCGGGCTGTT CTGGGCGATG AGCCATGCCA CCGGCCAGGG CGAGGACGTG
ATCGCCAAGC TGATCCGCAA GGTGCTGTAC GTCGGCGCCT TCGCCTACAT CATCGGCAAC
TTCAACTGGT TGGTCGGCAT CGTGTTCCGC TCCTTCGCCG GGCTGGGCCT GACGGCCAGC
GGCTCGACCT TGAGCATGGA GAACTTCCTG CAACCGGGCC GGCTGGCGAA GGTCGGCATC
GACGCCGGGG CGCCGATCCT GAAACAGATC GGCGACATGG CGGGCTTTCC CGAAGTGTTC
GTGAACATCA CGCCCATCGT CGTGATGTTC CTCGCGTGGC TGATCGTCCT GCTGTGCTTC
TTCGTGCTGG CGATCCAGCT TTTCATCACG CTGATCGAGT TCAAGCTAAC AACGCTCGCG
GGCTTCGTGC TGGTGCCGTT CGCGCTGTGG AACAAGACGG CGTTCCTGGC CGAGAAGGTA
CTTGGCAACG TGGTGTCGTC AGGCATCAAG GTGCTGGTGC TCGCGGTCAT CGTCGGCATC
GGCTCCGGGC TGTTCGCCGA GTTTCAGGTG CAGCCGGCCG AGCCATCCAT CGACCACTCC
GTGGTCGTGA TGCTGGCCTC GCTGACCCTG TTGGCGCTGG GCATCTTCGG GCCGGGCATT
GCGACCGGGC TGGTGTCCGG CGGGCCGCAG CTCGGCGCGG GTGCGATGGC CGGTGCCGCT
CTGGGTGCGG CCGGTGCTGC TGTTGCCGTG GGCGCCGCAG CCACGGGCGT CGGCGGTGCA
GTCGCCGCCG GGGCGCGCAT GGCGCCCGCA GCCGCCAGGC TGGCGGGCAG CGGAGCGCGG
GCCGCCACCG GAGCCGCCAG CAGCGCACGG TCAGCGTTTC AGGCGGGTTC TGCATCCGCT
GGCGGTGGCC TCAGGGGCAC AGCCGCCGGC GTGGGCAATG TCGCCAAGAC CGGCGCACAG
GCGGCCGGGC AGAAGGTGGC CGAAGGCGCG CGCTCGATGA GGGAGCATGT CGCTGCTGCC
TTCCGGCCCG ACGACGCCGG ATCGGCTTCG GGGGCCGGCG CCGCGCAGGC GGCAAACGAG
CCAACCCCAT CCACTGCGCA ACCCGCCTGG GCCAAGCGTC TGCATCGCAG ACAGCAGCTC
ACCCATGCCG CGACGACTGC CGCCCACACG CTGCGCGGCG GCGATGGCGG TAGTTCCAGC
CAGGGGCCAA GCCTTCGTGA TTCCGATTCC TGA
 
Protein sequence
MNDVTVIDRF LDTFSRYIDS GFGLLHGEVA FLTATLIVID MTLAGLFWAM SHATGQGEDV 
IAKLIRKVLY VGAFAYIIGN FNWLVGIVFR SFAGLGLTAS GSTLSMENFL QPGRLAKVGI
DAGAPILKQI GDMAGFPEVF VNITPIVVMF LAWLIVLLCF FVLAIQLFIT LIEFKLTTLA
GFVLVPFALW NKTAFLAEKV LGNVVSSGIK VLVLAVIVGI GSGLFAEFQV QPAEPSIDHS
VVVMLASLTL LALGIFGPGI ATGLVSGGPQ LGAGAMAGAA LGAAGAAVAV GAAATGVGGA
VAAGARMAPA AARLAGSGAR AATGAASSAR SAFQAGSASA GGGLRGTAAG VGNVAKTGAQ
AAGQKVAEGA RSMREHVAAA FRPDDAGSAS GAGAAQAANE PTPSTAQPAW AKRLHRRQQL
THAATTAAHT LRGGDGGSSS QGPSLRDSDS